RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CCZ1BP86790 482 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 CCZ1P86791 482 aaPredicted RBP16.13■□□□□ 0.17
SSH1-208ENST00000548522 AP1B1Q10567 949 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 FAM69BQ5VUD6 431 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 PDPK2PQ6A1A2 396 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 WASH2PQ6VEQ5 465 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 CPT1CQ8TCG5 803 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 TADA1Q96BN2 335 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 ZNF830Q96NB3 372 aaPredicted RBP16.13■□□□□ 0.17
SSH1-208ENST00000548522 RNF157Q96PX1 679 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 MAGEE1Q9HCI5 957 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 WASH6PQ9NQA3 447 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 LUZP4Q9P127 313 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 CTTNBP2NLQ9P2B4 639 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 PYCARDQ9ULZ3 195 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 PSMD13Q9UNM6 376 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 ARGFXA6NJG6 315 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 C21orf140B9A014 251 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 SEMA7AO75326 666 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 VPS4BO75351 444 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 PBX1P40424 430 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 CTSCP53634 463 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 CDK18Q07002 472 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 TBX2Q13207 712 aaPredicted RBP16.12■□□□□ 0.17
SSH1-208ENST00000548522 UGT8Q16880 541 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 DUS1LQ6P1R4 473 aaKnown RBP16.12■□□□□ 0.17
SSH1-208ENST00000548522 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 SIDT2Q8NBJ9 832 aaKnown RBP16.12■□□□□ 0.17
SSH1-208ENST00000548522 NAT14Q8WUY8 206 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 OLFM3Q96PB7 478 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 MAP3K3Q99759 626 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 PDE7BQ9NP56 450 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 UBP1Q9NZI7 540 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 SEMA5BQ9P283 1151 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 RARRES3Q9UL19 164 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 VPS4AQ9UN37 437 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 BZW2Q9Y6E2 419 aaKnown RBP16.12■□□□□ 0.17
SSH1-208ENST00000548522 ITPR2Q14571 2701 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 CSMD1Q96PZ7 3565 aa16.12■□□□□ 0.17
SSH1-208ENST00000548522 A0A1W2PQJ5 194 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 LRRD1A4D1F6 860 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 C3orf70A6NLC5 250 aaPredicted RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 KIF2AO00139 706 aaPredicted RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 DDX3YO15523 660 aaKnown RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 PMPCBO75439 489 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 SORBS2O94875 1100 aaKnown RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 MT-ND3P03897 115 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 FECHP22830 423 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 KDELR1P24390 212 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 PTPN4P29074 926 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 PGDP52209 483 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 TMEM115Q12893 351 aaPredicted RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 RPE65Q16518 533 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 PRAMEF17Q5VTA0 474 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 MAP7D3Q8IWC1 876 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 RBM12BQ8IXT5 1001 aaKnown RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 TTC30BQ8N4P2 665 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 EFCAB3Q8N7B9 438 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 RASGEF1AQ8N9B8 481 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 SLC38A9Q8NBW4 561 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 GALNT11Q8NCW6 608 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 GDAP1Q8TB36 358 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 SYN2Q92777 582 aaPredicted RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 PPM1MQ96MI6 270 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 VPS35Q96QK1 796 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 RAB33BQ9H082 229 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 SLC25A51Q9H1U9 297 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 RAD18Q9NS91 495 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 FGF21Q9NSA1 209 aa16.11■□□□□ 0.17
SSH1-208ENST00000548522 CFAP20Q9Y6A4 193 aaKnown RBP16.11■□□□□ 0.17
SSH1-208ENST00000548522 A1L4Q6 167 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 F5H423 210 aaPredicted RBP16.1■□□□□ 0.17
SSH1-208ENST00000548522 NDST3O95803 873 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 PTGIRP43119 386 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 CHRNA4P43681 627 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 CCL11P51671 97 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 GPS2Q13227 327 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 TRIM14Q14142 442 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 NFE2L1Q14494 772 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 PLCL1Q15111 1095 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 GPR19Q15760 415 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 FHL5Q5TD97 284 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 SLC9A4Q6AI14 798 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 LCN10Q6JVE6 187 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 FBXO38Q6PIJ6 1188 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 UBXN4Q92575 508 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 ZNF514Q96K75 400 aaPredicted RBP16.1■□□□□ 0.17
SSH1-208ENST00000548522 SLC25A23Q9BV35 468 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 IL26Q9NPH9 171 aa16.1■□□□□ 0.17
SSH1-208ENST00000548522 BUD23O43709 281 aaKnown RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A9O60656 530 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 POP7O75817 140 aaKnown RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 RECKO95980 971 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 GYPCP04921 128 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 VCLP18206 1134 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A6P19224 532 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A1P22309 533 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A4P22310 534 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms