RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 NAA35Q5VZE5 725 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 B3GNTL1Q67FW5 361 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 FCRL6Q6DN72 434 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 KLHL10Q6JEL2 608 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 ABRAXAS1Q6UWZ7 409 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 MEX3BQ6ZN04 569 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 KMT5CQ86Y97 462 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 FAM71AQ8IYT1 594 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 OR8K5Q8NH50 307 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 OR1L3Q8NH93 324 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 CXorf40BQ96DE9 158 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 IP6K3Q96PC2 410 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 SMR3AQ99954 134 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 CARD9Q9H257 536 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 ACTR5Q9H9F9 607 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 DNAJC12Q9UKB3 198 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 FZD10Q9ULW2 581 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 WDR37Q9Y2I8 494 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 PPIL1Q9Y3C6 166 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 PTRH2Q9Y3E5 179 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 ABCA4P78363 2273 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 RTTNQ86VV8 2226 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 SEC16AO15027 2179 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 PSMA7O14818 248 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 FGF10O15520 208 aaPredicted RBP15□□□□□ -0.01
CLSTN3-216ENST00000545663 WISP2O76076 250 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 PYGLP06737 847 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 IL4RP24394 825 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 RFC1P35251 1148 aaPredicted RBP15□□□□□ -0.01
CLSTN3-216ENST00000545663 ARCN1P48444 511 aaKnown RBP15□□□□□ -0.01
CLSTN3-216ENST00000545663 MAXP61244 160 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 PPP2R2AP63151 447 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 IL10RBQ08334 325 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 RFTN1Q14699 578 aaPredicted RBP15□□□□□ -0.01
CLSTN3-216ENST00000545663 TLR1Q15399 786 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 CAMK4Q16566 473 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 CT47A1Q5JQC4 288 aaPredicted RBP15□□□□□ -0.01
CLSTN3-216ENST00000545663 MTFR2Q6P444 385 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 TRIM72Q6ZMU5 477 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 GPR150Q8NGU9 434 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 ADAMTS18Q8TE60 1221 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 NR4A3Q92570 626 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 FAM81BQ96LP2 452 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 AGAP3Q96P47 875 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 NUDCD1Q96RS6 583 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 ENKD1Q9H0I2 346 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 SIX2Q9NPC8 291 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 CACNA1CQ13936 2221 aa15□□□□□ -0.01
CLSTN3-216ENST00000545663 CCDC88CQ9P219 2028 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 TLCD2A6NGC4 264 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 C9J4A7 227 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 CLDN7O95471 211 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 CLDN14O95500 239 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 PON1P27169 355 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 HADHAP40939 763 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 RENBPP51606 427 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 PLCL1Q15111 1095 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 INSCQ1MX18 579 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 ZFYVE27Q5T4F4 411 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 ARMC12Q5T9G4 340 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 NCCRP1Q6ZVX7 275 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 NPWQ8N729 165 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 MLKLQ8NB16 471 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 OR1N1Q8NGS0 311 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 DHTKD1Q96HY7 919 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 CXXC4Q9H2H0 198 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 GPATCH2LQ9NWQ4 482 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 SOHLH2Q9NX45 425 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 BTRCQ9Y297 605 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 PADI2Q9Y2J8 665 aa14.99□□□□□ -0.01
CLSTN3-216ENST00000545663 FN1P02751 2386 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 CNOT3O75175 753 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 ZBTB11O95625 1053 aaPredicted RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 MMEP08473 750 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 ZNF7P17097 686 aaPredicted RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 MST1P26927 711 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 TPI1P60174 286 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 NOMO3P69849 1222 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 NFKBIBQ15653 356 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 TMTC4Q5T4D3 741 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 AGAP7PQ5VUJ5 663 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 ZNF385CQ66K41 422 aaPredicted RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 LINC00696Q6ZRV3 163 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 RBM43Q6ZSC3 357 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 NOP9Q86U38 636 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 ACBD4Q8NC06 268 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 AGAP4Q96P64 663 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 HRASLS2Q9NWW9 162 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 MAN1B1Q9UKM7 699 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 ATRQ13535 2644 aa14.98□□□□□ -0.01
CLSTN3-216ENST00000545663 DOCK10Q96BY6 2186 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 BICDL2A1A5D9 508 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 SLC9B1P1A6NJY1 282 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 TMEM150CB9EJG8 249 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 MTA2O94776 668 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 PEX11BO96011 259 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 IGHEP01854 428 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 UMODP07911 640 aa14.97□□□□□ -0.01
CLSTN3-216ENST00000545663 CBSLP0DN79 551 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms