RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ZNF140P52738 457 aaPredicted RBP14.86□□□□□ -0.03
USP28-214ENST00000545540 OXCT1P55809 520 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 RPL38P63173 70 aaKnown RBP14.86□□□□□ -0.03
USP28-214ENST00000545540 RCAN2Q14206 197 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 ATP6AP1Q15904 470 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 AP5B1Q2VPB7 878 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 LCN8Q6JVE9 175 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 ELMSAN1Q6PJG2 1045 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 C17orf99Q6UX52 265 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 FRA10AC1Q70Z53 315 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 OR4F6Q8NGB9 312 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 C9orf16Q9BUW7 83 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 FANCEQ9HB96 536 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 SYTL2Q9HCH5 934 aa14.86□□□□□ -0.03
USP28-214ENST00000545540 BOLA2-SMG1P6H3BVE0 249 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 E2F3O00716 465 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 VNN2O95498 520 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 CHEK2O96017 543 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 HSD17B1P14061 328 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 IL2P60568 153 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 NFKB2Q00653 900 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 SNX29P2Q8IUI4 249 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 LRRC49Q8IUZ0 686 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 ZC3H7AQ8IWR0 971 aaKnown RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 COLGALT2Q8IYK4 626 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 CD200R1Q8TD46 325 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 TMBIM1Q969X1 311 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 EID2BQ96D98 161 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 ING2Q9H160 280 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 VAPAQ9P0L0 249 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 CIDEBQ9UHD4 219 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 AGO1Q9UL18 857 aaKnown RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 TCRBV5S2A0A599 114 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 LCHNA4D1U4 455 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 AQP12BA6NM10 295 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 C2orf81A6NN90 581 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 H3BMQ9 156 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 CCR3P51677 355 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 PRKCZQ05513 592 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 NKG7Q16617 165 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 LRRC73Q5JTD7 316 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 RNF219Q5W0B1 726 aaPredicted RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 GPR180Q86V85 440 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 AQP12AQ8IXF9 295 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 TMEM199Q8N511 208 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 ZUFSPQ96AP4 578 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 COG8Q96MW5 612 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 TRIB3Q96RU7 358 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 EGFL8Q99944 293 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 TRIM15Q9C019 465 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 IFT80Q9P2H3 777 aaPredicted RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 IGLV3-10A0A075B6K4 115 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 VPS26AO75436 327 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 EFNA1P20827 205 aaPredicted RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 MYF6P23409 242 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 FSHRP23945 695 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 MZF1P28698 734 aaPredicted RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 NFE2Q16621 373 aaPredicted RBP14.85□□□□□ -0.03
USP28-214ENST00000545540 PARP15Q460N3 678 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 HACD2Q6Y1H2 254 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 C10orf111Q8N326 155 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 LKAAEAR1Q8TD35 194 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 DTNBP1Q96EV8 351 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 NSMCE2Q96MF7 247 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 DERL2Q9GZP9 239 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 ACTL8Q9H568 366 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 ARMC7Q9H6L4 198 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 SLC6A13Q9NSD5 602 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 HACD3Q9P035 362 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
USP28-214ENST00000545540 MTMR11A4FU01 709 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 UNCXA6NJT0 531 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 BBIP1A8MTZ0 92 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 OAZ2O95190 189 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 RPS17P08708 135 aaKnown RBP14.84□□□□□ -0.03
USP28-214ENST00000545540 LSM3P62310 102 aaKnown RBP14.84□□□□□ -0.03
USP28-214ENST00000545540 ATP1A4Q13733 1029 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 PPP1R2P1Q96PQ5 205 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 CCDC90BQ9GZT6 254 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 NTN4Q9HB63 628 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 NLE1Q9NVX2 485 aaPredicted RBP14.84□□□□□ -0.03
USP28-214ENST00000545540 XYLBO75191 536 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 RASAL1O95294 804 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 TYMPP19971 482 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 AGXTP21549 392 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 TPD52P55327 224 aaPredicted RBP14.84□□□□□ -0.03
USP28-214ENST00000545540 NAA20P61599 178 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 MEP1AQ16819 746 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 ABRAXAS1Q6UWZ7 409 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 SCML4Q8N228 414 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 RNF175Q8N4F7 328 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 RHEBL1Q8TAI7 183 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 CIPCQ9C0C6 399 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 IPPKQ9H8X2 491 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 PDFQ9HBH1 243 aa14.84□□□□□ -0.03
USP28-214ENST00000545540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.84□□□□□ -0.03
USP28-214ENST00000545540 AXIN1O15169 862 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 LRATO95237 230 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 ALBP02768 609 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms