RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZNF578Q96N58 590 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-222ENST00000544585 HIST1H2AAQ96QV6 131 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 HNRNPABQ99729 332 aaKnown RBP6.22□□□□□ -1.41
CPSF7-222ENST00000544585 NUDT22Q9BRQ3 303 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 PTDSS2Q9BVG9 487 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 TRIM9Q9C026 710 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 LHX5Q9H2C1 402 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 DPEP3Q9H4B8 488 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 CSNK1G1Q9HCP0 422 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 TMEM30AQ9NV96 361 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 PANK4Q9NVE7 773 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 NFU1Q9UMS0 254 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 USP22Q9UPT9 525 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 CNTN6Q9UQ52 1028 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 SCML2Q9UQR0 700 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 PTPRQQ9UMZ3 2332 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 PTPRJQ12913 1337 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 COL6A6A6NMZ7 2263 aa6.22□□□□□ -1.41
CPSF7-222ENST00000544585 TSC2P49815 1807 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FRMD3A2A2Y4 597 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A18PA6NE21 464 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A16PA6NEW6 464 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A9PA6NNJ1 464 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A5PA8MXJ8 464 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FFAR3O14843 346 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MAGEC1O60732 1142 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ATP5BP06576 529 aaKnown RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A15PP0C7V4 464 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A14PP0C7W9 464 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 DLATP10515 647 aaKnown RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 P4HA1P13674 534 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 HGFP14210 728 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 PGDP52209 483 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MAP3K7CLP57077 242 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 TMPRSS3P57727 454 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 DCAF7P61962 342 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC173Q0VFZ6 552 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 DNAJC3Q13217 504 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 E2F2Q14209 437 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 GRM7Q14831 915 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 SNRNP35Q16560 246 aaKnown RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D25Q3MII6 688 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 TTC31Q49AM3 519 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MPPE1Q53F39 396 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF667Q5HYK9 610 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 C10orf120Q5SQS8 335 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 HES3Q5TGS1 186 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 KIAA0895LQ68EN5 471 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ACAD10Q6JQN1 1059 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 SPOCD1Q6ZMY3 1216 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 CBWD2Q8IUF1 395 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC65Q8IXS2 484 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 SLC15A3Q8IY34 581 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ELOA2Q8IYF1 753 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 CPXM2Q8N436 756 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 EID2Q8N6I1 236 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 OR52N2Q8NGI0 321 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MBD3L2Q8NHZ7 208 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 DDI1Q8WTU0 396 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MED8Q96G25 268 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ZDHHC12Q96GR4 267 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 EPSTI1Q96J88 318 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 FAM84AQ96KN4 292 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 TIGD1Q96MW7 591 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 LGMNQ99538 433 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 NUDT16L1Q9BRJ7 211 aaKnown RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 CIPCQ9C0C6 399 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 DNAI2Q9GZS0 605 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 TMEM245Q9H330 911 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 CXorf36Q9H7Y0 433 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ERVMER34-1Q9H9K5 563 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 HECAQ9UBI9 543 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 KCND3Q9UK17 655 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 NDRG4Q9ULP0 352 aaKnown RBP6.21□□□□□ -1.42
CPSF7-222ENST00000544585 NEU2Q9Y3R4 380 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 KCTD3Q9Y597 815 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 NME7Q9Y5B8 376 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 ITPR1Q14643 2758 aa6.21□□□□□ -1.42
CPSF7-222ENST00000544585 MYO18BQ8IUG5 2567 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 SPTA1P02549 2419 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 LRRC72A6NJI9 287 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 TOR1BO14657 336 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 STX6O43752 255 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 RNASEH1O60930 286 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 BEST1O76090 585 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 MT-CO3P00414 261 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 KLKB1P03952 638 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 RPN1P04843 607 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 INHBBP09529 407 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 FAM200BP0CF97 657 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ACP1P24666 158 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 CD38P28907 300 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 RPS19P39019 145 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ACADVLP49748 655 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 PGFP49763 221 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 CSRP3P50461 194 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ERVPABLB-1P60509 514 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 MYL6P60660 151 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 RPS14P62263 151 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms