RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GRID2O43424 1007 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 KRT86O43790 486 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 IPO13O94829 963 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 KIAA0754O94854 1291 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 IGSF6O95976 241 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 GLI4P10075 376 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 RAC2P15153 192 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 NR2F2P24468 414 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 PTPN4P29074 926 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 TRHRP34981 398 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 TRIM23P36406 574 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 JAM2P57087 298 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ARF5P84085 180 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 PDE1BQ01064 536 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ADAM9Q13443 819 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF235Q14590 738 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 GPR19Q15760 415 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 MEA1Q16626 185 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF630Q2M218 657 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 MYLK3Q32MK0 819 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ALFQ53S48 1182 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 BRMS1LQ5PSV4 323 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 CFAP58Q5T655 872 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 VWA5B1Q5TIE3 1220 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 CPZQ66K79 652 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 MTFR2Q6P444 385 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 FOXR2Q6PJQ5 311 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 MED25Q71SY5 747 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 PLXDC1Q8IUK5 500 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 SFTPA2Q8IWL1 248 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 NAGSQ8N159 534 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 RBMXL3Q8N7X1 1067 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 GLIS1Q8NBF1 620 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 AVL9Q8NBF6 648 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 CHDHQ8NE62 594 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 FDCSPQ8NFU4 85 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 CCL4L1Q8NHW4 92 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 COG1Q8WTW3 980 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 CASKIN2Q8WXE0 1202 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ARHGEF2Q92974 986 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 FUBP1Q96AE4 644 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 DHX58Q96C10 678 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 C14orf79Q96F83 325 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 HMCESQ96FZ2 354 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 C1orf74Q96LT6 269 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 GDAP1L1Q96MZ0 367 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 FCRL4Q96PJ5 515 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 RANBP9Q96S59 729 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 SMAD5Q99717 465 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 BARD1Q99728 777 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 NCAPGQ9BPX3 1015 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 WRAP53Q9BUR4 548 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 TRIM8Q9BZR9 551 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 BRD8Q9H0E9 1235 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 SIK2Q9H0K1 926 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 KCTD10Q9H3F6 313 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ACTL8Q9H568 366 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 RETREG1Q9H6L5 497 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 SMURF1Q9HCE7 757 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 PHPT1Q9NRX4 125 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 EXOC1Q9NV70 894 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ASNSD1Q9NWL6 643 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 KCTD5Q9NXV2 234 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 COX16Q9P0S2 106 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ZNHIT2Q9UHR6 403 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 TRAF3IP3Q9Y228 551 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 OSGIN2Q9Y236 505 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 CLIC4Q9Y696 253 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 OTOGQ6ZRI0 2925 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 SCN8AQ9UQD0 1980 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 KNL1Q8NG31 2342 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 IGLV3-10A0A075B6K4 115 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM200CA6NKL6 621 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 DRGXA6NNA5 263 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ALG1L2C9J202 215 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 KCNN4O15554 427 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 GPR39O43194 453 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 THAP12O43422 761 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 MED7O43513 233 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 PRICKLE3O43900 615 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 HSF2BPO75031 334 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SPAG6O75602 509 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ZMPSTE24O75844 475 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM63AO94886 807 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 F9P00740 461 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 IGHEP01854 428 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 PLEKP08567 350 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 STSP08842 583 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ELFN1P0C7U0 828 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 FGF5P12034 268 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 COL6A2P12110 1019 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SLC2A4P14672 509 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TACR1P25103 407 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 HTR1EP28566 365 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 GKP32189 559 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ACTR1BP42025 376 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 GPD2P43304 727 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 GNPDA1P46926 289 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms