RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SNX7Q9UNH6 387 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 RWDD3Q9Y3V2 267 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SPACA6W5XKT8 324 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 FAM234BA2RU67 622 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 RPL3P39023 403 aaKnown RBP19.16■□□□□ 0.66
SUDS3-204ENST00000543473 OR2B6P58173 313 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 PHC1P78364 1004 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 NDUFAF6Q330K2 333 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 FAM174BQ3ZCQ3 159 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 CAND1Q86VP6 1230 aaKnown RBP19.16■□□□□ 0.66
SUDS3-204ENST00000543473 ZC3HC1Q86WB0 502 aaKnown RBP19.16■□□□□ 0.66
SUDS3-204ENST00000543473 FCGR1BQ92637 280 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 DPF3Q92784 378 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 TWNKQ96RR1 684 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SH3PXD2BA1X283 911 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 HNF4AP41235 474 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 NDUFV1P49821 464 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 HID1Q8IV36 788 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 OR52J3Q8NH60 311 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 CIPCQ9C0C6 399 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 ZNF696Q9H7X3 374 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SNX10Q9Y5X0 201 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SLC10A6Q3KNW5 377 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 USP45Q70EL2 814 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 SLC22A16Q86VW1 577 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 RASAL3Q86YV0 1011 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 OR8H1Q8NGG4 311 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 TEFMQ96QE5 360 aaKnown RBP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 C2orf49Q9BVC5 232 aaPredicted RBP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 EIF2B4Q9UI10 523 aaKnown RBP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 DENRO43583 198 aaKnown RBP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 RGS20O76081 388 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 SMPD1P17405 629 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 CTPS1P17812 591 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 STT3AP46977 705 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 HERVK_113P63132 956 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 CYP2A13Q16696 494 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 FAM151BQ6UXP7 276 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 ANKRD46Q86W74 232 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 UPF1Q92900 1129 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■□□□ 11.7
SUDS3-204ENST00000543473 ERVK-6Q9BXR3 956 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 RNASEH2AO75792 299 aaKnown RBP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 PRKD3O94806 890 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 NDST3O95803 873 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 PIGRP01833 764 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 HSPA7P48741 367 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 TGFBIQ15582 683 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 PLEKHG6Q3KR16 790 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 CPTPQ5TA50 214 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 SDHAF4Q5VUM1 108 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 USP43Q70EL4 1123 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 CHSY3Q70JA7 882 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 MAGEB10Q96LZ2 347 aaPredicted RBP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 AMBNQ9NP70 447 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 TRPV5Q9NQA5 729 aa19.15■□□□□ 0.66
SUDS3-204ENST00000543473 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.15■□□□□ 0.66
SUDS3-204ENST00000543473 CHRNA4P43681 627 aa19.14■□□□□ 0.66
SUDS3-204ENST00000543473 IL18Q14116 193 aa19.14■□□□□ 0.66
SUDS3-204ENST00000543473 KCNS3Q9BQ31 491 aa19.14■□□□□ 0.66
SUDS3-204ENST00000543473 SLITRK2Q9H156 845 aa19.14■□□□□ 0.66
SUDS3-204ENST00000543473 STK16O75716 305 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 SIX3O95343 332 aaPredicted RBP19.14■□□□□ 0.65
SUDS3-204ENST00000543473 TRBC1P01850 177 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 ERVK-8P63133 956 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 NOMO2Q5JPE7 1267 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 TAPT1Q6NXT6 567 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 ZNF773Q6PK81 442 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 DEF8Q6ZN54 512 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 STON2Q8WXE9 905 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 GPR22Q99680 433 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 ZCCHC2Q9C0B9 1178 aaKnown RBP19.14■□□□□ 0.65
SUDS3-204ENST00000543473 DCSTAMPQ9H295 470 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 TMED5Q9Y3A6 229 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 MYH6P13533 1939 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 GOT2P00505 430 aaKnown RBP19.14■□□□□ 0.65
SUDS3-204ENST00000543473 C9P02748 559 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 AHSGP02765 367 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 CYP4F8P98187 520 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 FEM1CQ96JP0 617 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 HNRNPABQ99729 332 aaKnown RBP19.14■□□□□ 0.65
SUDS3-204ENST00000543473 OSGEPL1Q9H4B0 414 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 DOT1LQ8TEK3 1739 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 CNTNAP1P78357 1384 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 FPGTO14772 594 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 CAPZA2P47755 286 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 MXD1Q05195 221 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 OGFRL1Q5TC84 451 aaPredicted RBP19.14■□□□□ 0.65
SUDS3-204ENST00000543473 MON1AQ86VX9 555 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 NAT16Q8N8M0 369 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 FNDC11Q9BVV2 318 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 TLE6Q9H808 572 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 MBD2Q9UBB5 411 aa19.14■□□□□ 0.65
SUDS3-204ENST00000543473 SNX4O95219 450 aa19.13■□□□□ 0.65
SUDS3-204ENST00000543473 CYP11A1P05108 521 aa19.13■□□□□ 0.65
SUDS3-204ENST00000543473 NR2F1P10589 423 aa19.13■□□□□ 0.65
SUDS3-204ENST00000543473 MBTD1Q05BQ5 628 aa19.13■□□□□ 0.65
SUDS3-204ENST00000543473 PPP1R8Q12972 351 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms