RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PIP5K1CO60331 668 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SNAP91O60641 907 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CA3P07451 260 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SNRPB2P08579 225 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 LINC00032P0C843 101 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 UNGP13051 313 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 NQO1P15559 274 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CHRNB2P17787 502 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PPIBP23284 216 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 FEN1P39748 380 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 GABRB2P47870 512 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CDKN1CP49918 316 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CCNHP51946 323 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DSG1Q02413 1049 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 GPR33Q49SQ1 333 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TCHHL1Q5QJ38 904 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CEP97Q8IW35 865 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MCEMP1Q8IX19 187 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PRSS58Q8IYP2 241 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC43A3Q8NBI5 491 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC22A18Q96BI1 424 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TSSK3Q96PN8 268 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 POLR3BQ9NW08 1133 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 FNIP2Q9P278 1114 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF229Q9UJW7 825 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PCDHB3Q9Y5E6 796 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PCDHB11Q9Y5F2 797 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DOT1LQ8TEK3 1739 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SPEF2Q9C093 1822 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 RNF225M0QZC1 329 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PI15O43692 258 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 NT5EP21589 574 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PIK3R1P27986 724 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 RPL4P36578 427 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CCNFP41002 786 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 STXBP1P61764 594 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MYBPC3Q14896 1274 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MORN1Q5T089 497 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CPTPQ5TA50 214 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM129CQ86XR2 697 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZDHHC13Q8IUH4 622 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MPP5Q8N3R9 675 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 FBXO30Q8TB52 745 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PRR7Q8TB68 274 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 OVCA2Q8WZ82 227 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CPT1BQ92523 772 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 OR52E6Q96RD3 313 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF607Q96SK3 696 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 GPR62Q9BZJ7 368 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SMG9Q9H0W8 520 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZSCAN32Q9NX65 697 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 NUDT4Q9NZJ9 180 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF490Q9ULM2 529 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 C9J4A7 227 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PRR23D1E9PI22 279 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MAN2B1O00754 1011 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 BIRC5O15392 142 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DDX3YO15523 660 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 RGS5O15539 181 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 LAMTOR5O43504 91 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PRLP01236 227 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TRBC1P01850 177 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SHBGP04278 402 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 HSMCR30P0CW71 290 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PRR23D2P0DMB1 279 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 IDO1P14902 403 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 NDUFV2P19404 249 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 OGNP20774 298 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 HK2P52789 917 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DSG2Q14126 1118 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 C16orf72Q14CZ0 275 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CA9Q16790 459 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 UPP1Q16831 310 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 RFTN2Q52LD8 501 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MED27Q6P2C8 311 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SNX20Q7Z614 316 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 EPHX4Q8IUS5 362 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CHERPQ8IWX8 916 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZCCHC10Q8TBK6 192 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MARK4Q96L34 752 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SMOQ99835 787 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TDRD1Q9BXT4 1180 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 GSDMCQ9BYG8 508 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DCLRE1BQ9H816 532 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SORCS3Q9UPU3 1222 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PRRT4C9JH25 899 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TRAFD1O14545 582 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 WBP4O75554 376 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 MATN4O95460 622 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 CLDN9O95484 217 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TNFP01375 233 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 PROCP04070 461 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 C8GP07360 202 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DLDP09622 509 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TFPIP10646 304 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SMIM11AP58511 58 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SH3PXD2AQ5TCZ1 1133 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms