RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 POLEQ07864 2286 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 UBA6A0AVT1 1052 aaPredicted RBP17.86■□□□□ 0.45
RAP1B-229ENST00000543393 ARHGAP10A1A4S6 786 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 LGALS16A8MUM7 142 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 F5H423 210 aaPredicted RBP17.86■□□□□ 0.45
RAP1B-229ENST00000543393 MEN1O00255 615 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 VEGFDO43915 354 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 FTLP02792 175 aaPredicted RBP17.86■□□□□ 0.45
RAP1B-229ENST00000543393 DCDC1P59894 354 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 UBXN1Q04323 297 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 GALNT2Q10471 571 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 PDPK2PQ6A1A2 396 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 C11orf96Q7Z7L8 435 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 ZNF501Q96CX3 271 aaPredicted RBP17.86■□□□□ 0.45
RAP1B-229ENST00000543393 LRFN5Q96NI6 719 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 CD180Q99467 661 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 FANCLQ9NW38 375 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 MYO1AQ9UBC5 1043 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 SCINQ9Y6U3 715 aa17.86■□□□□ 0.45
RAP1B-229ENST00000543393 MDC1Q14676 2089 aaKnown RBP17.86■□□□□ 0.45
RAP1B-229ENST00000543393 SLC4A1P02730 911 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 MMP2P08253 660 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 VCLP18206 1134 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 CCNCP24863 283 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 HNRNPH3P31942 346 aaKnown RBP17.85■□□□□ 0.45
RAP1B-229ENST00000543393 CD86P42081 329 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 ATP1A4Q13733 1029 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 GALNT3Q14435 633 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 NAA30Q147X3 362 aaPredicted RBP17.85■□□□□ 0.45
RAP1B-229ENST00000543393 PLCL1Q15111 1095 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 CCDC122Q5T0U0 273 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 VWA5B1Q5TIE3 1220 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 OR8K5Q8NH50 307 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 LRRN4Q8WUT4 740 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 TEKT4Q8WW24 435 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 SGSM3Q96HU1 749 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 ERGIC2Q96RQ1 377 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 ADGRE3Q9BY15 652 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 LATS2Q9NRM7 1088 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 NFKBIL1Q9UBC1 381 aaPredicted RBP17.85■□□□□ 0.45
RAP1B-229ENST00000543393 SHOC2Q9UQ13 582 aa17.85■□□□□ 0.45
RAP1B-229ENST00000543393 COPG1Q9Y678 874 aaKnown RBP17.85■□□□□ 0.45
RAP1B-229ENST00000543393 OR5K3A6NET4 321 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 ZBTB11O95625 1053 aaPredicted RBP17.84■□□□□ 0.45
RAP1B-229ENST00000543393 CAPN1P07384 714 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 CD48P09326 243 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 PIRTP0C851 137 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 GRNP28799 593 aaKnown RBP17.84■□□□□ 0.45
RAP1B-229ENST00000543393 KRT81Q14533 505 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 IFI16Q16666 785 aaKnown RBP17.84■□□□□ 0.45
RAP1B-229ENST00000543393 KYNUQ16719 465 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 CRB2Q5IJ48 1285 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 TMTC4Q5T4D3 741 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 NCBP2-AS2Q69YL0 99 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 TMC3Q7Z5M5 1100 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 TRAPPC5Q8IUR0 188 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 CPT1BQ92523 772 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 FATE1Q969F0 183 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 CLIP3Q96DZ5 547 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 TSGA13Q96PP4 275 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 BARD1Q99728 777 aaKnown RBP17.84■□□□□ 0.45
RAP1B-229ENST00000543393 ILKAPQ9H0C8 392 aaPredicted RBP17.84■□□□□ 0.45
RAP1B-229ENST00000543393 MRPL47Q9HD33 250 aaKnown RBP17.84■□□□□ 0.45
RAP1B-229ENST00000543393 RAD18Q9NS91 495 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 HRASLS2Q9NWW9 162 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 ENTPD4Q9Y227 616 aa17.84■□□□□ 0.45
RAP1B-229ENST00000543393 SEC16AO15027 2179 aa17.83■□□□□ 0.45
RAP1B-229ENST00000543393 GZMAP12544 262 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 RORAP35398 523 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 SLC25A11Q02978 314 aaKnown RBP17.83■□□□□ 0.44
RAP1B-229ENST00000543393 TMEM115Q12893 351 aaPredicted RBP17.83■□□□□ 0.44
RAP1B-229ENST00000543393 ABRQ12979 859 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 PAFAH1B3Q15102 231 aaKnown RBP17.83■□□□□ 0.44
RAP1B-229ENST00000543393 RPE65Q16518 533 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 FAM198BQ6UWH4 519 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 INPP5DQ92835 1189 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 UNKQ9C0B0 810 aaKnown RBP17.83■□□□□ 0.44
RAP1B-229ENST00000543393 TMEM63CQ9P1W3 806 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 LIMA1Q9UHB6 759 aaKnown RBP17.83■□□□□ 0.44
RAP1B-229ENST00000543393 TMPRSS11EQ9UL52 423 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 PSMD13Q9UNM6 376 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 NTNG1Q9Y2I2 539 aa17.83■□□□□ 0.44
RAP1B-229ENST00000543393 F8P00451 2351 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 ADGRG4Q8IZF6 3080 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 DDX3YO15523 660 aaKnown RBP17.82■□□□□ 0.44
RAP1B-229ENST00000543393 BPIP17213 487 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 GLRBP48167 497 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 PIGHQ14442 188 aaPredicted RBP17.82■□□□□ 0.44
RAP1B-229ENST00000543393 LYPLAL1Q5VWZ2 237 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 FBXO38Q6PIJ6 1188 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 SYTL1Q8IYJ3 562 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 UBE2Q2Q8WVN8 375 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 PPM1MQ96MI6 270 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 GPR63Q9BZJ6 419 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 NUP62CLQ9H1M0 184 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 HAUS4Q9H6D7 363 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 MAGEE1Q9HCI5 957 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 PCMTD2Q9NV79 361 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 SOHLH2Q9NX45 425 aa17.82■□□□□ 0.44
RAP1B-229ENST00000543393 BTRCQ9Y297 605 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms