RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CALML6Q8TD86 181 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 PYROXD1Q8WU10 500 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 SIRPGQ9P1W8 387 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 TBC1D29Q9UFV1 150 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 DNAJC16Q9Y2G8 782 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 PRSS21Q9Y6M0 314 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 LY6G6EA0A0G2JKS1 128 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 B4DGG1 531 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 F8W8V4 182 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 PRMT5O14744 637 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 NOBOXO60393 691 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 RHOXF2BP0C7M4 288 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 OR56A5P0C7T3 313 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 CKMT1AP12532 417 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 CKMT2P17540 419 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 ID4P47928 161 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 RPIAP49247 311 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 DUSP3P51452 185 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 FRG1Q14331 258 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 NR0B2Q15466 257 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 HSP90AA5PQ58FG0 334 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 ZNF470Q6ECI4 717 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 KYQ8NBH2 561 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 OR2L2Q8NH16 312 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 ZDHHC1Q8WTX9 485 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 IFT81Q8WYA0 676 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 CERS2Q96G23 380 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 RHOXF2Q9BQY4 288 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 CCM2Q9BSQ5 444 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 FAM167BQ9BTA0 163 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 P2RY12Q9H244 342 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 OSGEPL1Q9H4B0 414 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 VPS37BQ9H9H4 285 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 EVA1BQ9NVM1 165 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 GULP1Q9UBP9 304 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 U3KQA8 63 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 DNAH14Q0VDD8 3507 aa16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 ARHGEF17Q96PE2 2063 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-203ENST00000543002 C17orf113A0A1B0GUU1 675 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 A6NCN8 305 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 GIPC1O14908 333 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 SNX2O60749 519 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 EML2O95834 649 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 GSTM1P09488 218 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 ERVK-10P10266 1014 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 IDSP22304 550 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 RPS3P23396 243 aaKnown RBP eCLIP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 PBLDP30039 288 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 DAB2P98082 770 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 GSTM4Q03013 218 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 CUL1Q13616 776 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 HLTFQ14527 1009 aaKnown RBP eCLIP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 WASH2PQ6VEQ5 465 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 CCDC25Q86WR0 208 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 LRRC6Q86X45 466 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 C17orf82Q86X59 251 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 DENND6AQ8IWF6 608 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 SFTPA2Q8IWL1 248 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 PALM2Q8IXS6 379 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 IFT20Q8IY31 132 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 NAGSQ8N159 534 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 GABPB2Q8TAK5 448 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 GSDMBQ8TAX9 411 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 HM13Q8TCT9 377 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 LPGAT1Q92604 370 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 WASH6PQ9NQA3 447 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 IARS2Q9NSE4 1012 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 INTS10Q9NVR2 710 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 MTRF1LQ9UGC7 380 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 PADI4Q9UM07 663 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 ZFC3H1O60293 1989 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 CNOT1A5YKK6 2376 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 GOLGA4Q13439 2230 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-203ENST00000543002 SPAARA0A1B0GVQ0 90 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 EME2A4GXA9 379 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 S1PR4O95977 384 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 FTH1P02794 183 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 MYF5P13349 255 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 F3P13726 295 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 SLC2A4P14672 509 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 ACP1P24666 158 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 ECHS1P30084 290 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 SLC1A2P43004 574 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 MAGEA4P43358 317 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 CARSP49589 748 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 ADARP55265 1226 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 DNAJC3Q13217 504 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 CTBP1Q13363 440 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 NFE2L1Q14494 772 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 ZNF658BQ4V348 819 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 C14orf28Q4W4Y0 310 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 TEX35Q5T0J7 233 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 AGAP9Q5VTM2 703 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 METRNLQ641Q3 311 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 IYDQ6PHW0 289 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 ABRAXAS1Q6UWZ7 409 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 FAM83HQ6ZRV2 1179 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 CEP128Q6ZU80 1094 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms