RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 DET1Q7L5Y6 550 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 GSTA5Q7RTV2 222 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 CLEC14AQ86T13 490 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 FBXO39Q8N4B4 442 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 BEND7Q8N7W2 519 aaPredicted RBP15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 OR13J1Q8NGT2 312 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 ACTRT1Q8TDG2 376 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 COG1Q8WTW3 980 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 TMEM159Q96B96 161 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 OSBPL9Q96SU4 736 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 COPS8Q99627 209 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 STN1Q9H668 368 aaKnown RBP15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 ZDHHC3Q9NYG2 299 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 SNX12Q9UMY4 172 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 WDR37Q9Y2I8 494 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 MGAT4DA6NG13 374 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 PGRMC1O00264 195 aaKnown RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 GAS8O95995 478 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 ITGA2BP08514 1039 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 PRSS56P0CW18 603 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 RALBP11234 206 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 ATP1B2P14415 290 aaPredicted RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 MSNP26038 577 aaKnown RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 ACRV1P26436 265 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 RBMS1P29558 406 aaKnown RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 MAGEA6P43360 314 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 PRLHRP49683 370 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 CDK16Q00536 496 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 CACNG1Q06432 222 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 TRA2AQ13595 282 aaKnown RBP eCLIP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 NFE2L1Q14494 772 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 C16orf72Q14CZ0 275 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 SEPT7Q16181 437 aaKnown RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 ZRANB3Q5FWF4 1079 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 TSTD2Q5T7W7 516 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 TMEM71Q6P5X7 295 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 WDR74Q6RFH5 385 aaPredicted RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 TMEM26Q6ZUK4 368 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 NLRP9Q7RTR0 991 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 SERPINA9Q86WD7 417 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 OR2L2Q8NH16 312 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 OR10G6Q8NH81 332 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 NAT14Q8WUY8 206 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 PEX13Q92968 403 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 DCUN1D1Q96GG9 259 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 ZNF778Q96MU6 729 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 NAP1L3Q99457 506 aaPredicted RBP15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 AP1M1Q9BXS5 423 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 EPB41L1Q9H4G0 881 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC40A1Q9NP59 571 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 THSD1Q9NS62 852 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 POT1Q9NUX5 634 aa15.16■□□□□ 0.02
ECHDC2-223ENST00000542552 ADAMTS20P59510 1910 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 LOC400499M0QZD8 3231 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 PIKFYVEQ9Y2I7 2098 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 CCDC162PA2VCL2 907 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 OR52A4PA6NMU1 304 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 HGSO14964 777 aaPredicted RBP15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 DUX1O43812 170 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TNFSF15O95150 251 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 VIPP01282 170 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 THRAP10827 490 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 HGFP14210 728 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TPSB2P20231 275 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 FOXN2P32314 431 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TPSAB1Q15661 275 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 DBN1Q16643 649 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 ZNF658BQ4V348 819 aaPredicted RBP15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 PHF19Q5T6S3 580 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 RBM12BQ8IXT5 1001 aaKnown RBP15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 MAGOHBQ96A72 148 aaKnown RBP15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 SGSM3Q96HU1 749 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 CCDC74BQ96LY2 380 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TBC1D10AQ9BXI6 508 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 SMARCAL1Q9NZC9 954 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 OGFRQ9NZT2 677 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TMEM9Q9P0T7 183 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC2A6Q9UGQ3 507 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 ACSL5Q9ULC5 683 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 PYCARDQ9ULZ3 195 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 NEU2Q9Y3R4 380 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 TCAF1Q9Y4C2 921 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 LOXL2Q9Y4K0 774 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 PCDHGA7Q9Y5G6 932 aa15.15■□□□□ 0.02
ECHDC2-223ENST00000542552 IGSF10Q6WRI0 2623 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 PRAMEF33A0A0G2JMD5 474 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 C17orf113A0A1B0GUU1 675 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 OR51F1A6NGY5 319 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 CFAP99D6REC4 459 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 AP3B1O00203 1094 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 COILP38432 576 aaPredicted RBP15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 HALP42357 657 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 NPY2RP49146 381 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 PCBP4P57723 403 aaKnown RBP15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 BASP1P80723 227 aaKnown RBP15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 KCNJ11Q14654 390 aa15.14■□□□□ 0.01
ECHDC2-223ENST00000542552 RPE65Q16518 533 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms