RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 MAVSQ7Z434 540 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 PELI3Q8N2H9 469 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 AADATQ8N5Z0 425 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 CXorf40AQ8TE69 158 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 PDLIM5Q96HC4 596 aaKnown RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 SIKE1Q9BRV8 207 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 ERVK-6Q9BXR3 956 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 WWP1Q9H0M0 922 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 UBE2ZQ9H832 354 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 COG4Q9H9E3 785 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 UTP6Q9NYH9 597 aaKnown RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 NFKBIL1Q9UBC1 381 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 KIF26AQ9ULI4 1882 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 FADS3Q9Y5Q0 445 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 PRUNE2Q8WUY3 3088 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 LRRC14BA6NHZ5 514 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 CFAP99D6REC4 459 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 ZNF195O14628 629 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 TSPAN8P19075 237 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 NTSR1P30989 418 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 CCR7P32248 378 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 DRD3P35462 400 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 RGS4P49798 205 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 NFKB2Q00653 900 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 CCDC15Q0P6D6 951 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 SMAD4Q13485 552 aaKnown RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 E2F5Q15329 346 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 OCLNQ16625 522 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 GALNTL6Q49A17 601 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 TMEM52BQ4KMG9 183 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 LACTB2Q53H82 288 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 TMEM196Q5HYL7 178 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 PIP5KL1Q5T9C9 394 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 CYP2U1Q7Z449 544 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 RAB44Q7Z6P3 723 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 RALGPS2Q86X27 583 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 GPSM1Q86YR5 675 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 MYO1HQ8N1T3 1032 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 FBXO39Q8N4B4 442 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 HDDC3Q8N4P3 179 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 GBP7Q8N8V2 638 aaPredicted RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 GLYATL1Q969I3 302 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 RAB7BQ96AH8 199 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 TRPV5Q9NQA5 729 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 ZFP69BQ9UJL9 534 aa10.86□□□□□ -0.67
SCG3-202ENST00000542355 RRP15Q9Y3B9 282 aaKnown RBP10.86□□□□□ -0.67
SCG3-202ENST00000542355 A0A1W2PP55 124 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 OR2AG2A6NM03 316 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 MAGEC1O60732 1142 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 SERPINB5P36952 375 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 IDH3AP50213 366 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 HK3P52790 923 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 CDH13P55290 713 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 HSPA14Q0VDF9 509 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 GRSF1Q12849 480 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCG3-202ENST00000542355 TGFBIQ15582 683 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 TTLL9Q3SXZ7 439 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 UNC50Q53HI1 259 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 BEND7Q8N7W2 519 aaPredicted RBP10.85□□□□□ -0.67
SCG3-202ENST00000542355 IL17RCQ8NAC3 791 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 DDHD1Q8NEL9 900 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 NUS1Q96E22 293 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 L3HYPDHQ96EM0 354 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 VPS35Q96QK1 796 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 MKRN2Q9H000 416 aaKnown RBP10.85□□□□□ -0.67
SCG3-202ENST00000542355 GSTO2Q9H4Y5 243 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 LATS2Q9NRM7 1088 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 KCTD5Q9NXV2 234 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
SCG3-202ENST00000542355 MUC22E2RYF6 1773 aaPredicted RBP10.85□□□□□ -0.67
SCG3-202ENST00000542355 K7ESM1 405 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 MATN2O00339 956 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 SNX2O60749 519 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 DIAPH2O60879 1101 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 ADAM23O75077 832 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 RNASEH2AO75792 299 aaKnown RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 ADH1BP00325 375 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 ALOX15P16050 662 aaPredicted RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 C5AR1P21730 350 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 GPR1P46091 355 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 COPAP53621 1224 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 TMEM115Q12893 351 aaPredicted RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 BNIP1Q12981 228 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 STARD3Q14849 445 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 SH2D4BQ5SQS7 431 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 LDLRAP1Q5SW96 308 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 RAET1GQ6H3X3 334 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 CYHR1Q6ZMK1 362 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 FRMD7Q6ZUT3 714 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 CLNKQ7Z7G1 428 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 RAVER1Q8IY67 606 aaKnown RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 PPP1R36Q96LQ0 422 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 NMUR2Q9GZQ4 415 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 C8orf33Q9H7E9 229 aaPredicted RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 EML4Q9HC35 981 aaKnown RBP10.84□□□□□ -0.67
SCG3-202ENST00000542355 CD274Q9NZQ7 290 aa10.84□□□□□ -0.67
SCG3-202ENST00000542355 APOBEC2Q9Y235 224 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms