RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TAC4Q86UU9 113 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 NT5DC3Q86UY8 548 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TRABD2AQ86V40 505 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SLC22A16Q86VW1 577 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 JAMLQ86YT9 394 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SLC22A9Q8IVM8 553 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 KSR1Q8IVT5 923 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC103Q8IW40 242 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FAM217AQ8IXS0 508 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC105Q8IYK2 499 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 UBQLNLQ8IYU4 475 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ENTHD1Q8IYW4 607 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 LGI2Q8N0V4 545 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 KRT78Q8N1N4 520 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 EMC1Q8N766 993 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 POC5Q8NA72 575 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CAMKVQ8NCB2 501 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 LINC00116Q8NCU8 138 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 GSTCDQ8NEC7 633 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DENND6BQ8NEG7 585 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 OR10T2Q8NGX3 314 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CLHC1Q8NHS4 586 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SHKBP1Q8TBC3 707 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SPPL3Q8TCT6 385 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MGARPQ8TDB4 240 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DCAF4Q8WV16 495 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DDX1Q92499 740 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SNAPC3Q92966 411 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 NTAN1Q96AB6 310 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FBXL8Q96CD0 374 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MTERF3Q96E29 417 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MTMR8Q96EF0 704 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 C1orf159Q96HA4 380 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MS4A14Q96JA4 679 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC17Q96LX7 622 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FOPNLQ96NB1 174 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF285Q96NJ3 590 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CLUHP3Q96NS8 147 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CSPG4P5Q96PW8 444 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ORAI2Q96SN7 254 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TBCBQ99426 244 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DPYSL5Q9BPU6 564 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ZFYVE21Q9BQ24 234 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 HERPUD2Q9BSE4 406 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TUBGCP2Q9BSJ2 902 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DCUN1D5Q9BTE7 237 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 BRIP1Q9BX63 1249 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SLC13A1Q9BZW2 595 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 GLRX2Q9NS18 164 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FAM207AQ9NSI2 230 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 OLA1Q9NTK5 396 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PLCXD1Q9NUJ7 323 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 OLAHQ9NV23 265 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SETD4Q9NVD3 440 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DNAJC11Q9NVH1 559 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 INTS10Q9NVR2 710 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TAB2Q9NYJ8 693 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ERAP1Q9NZ08 941 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 GDE1Q9NZC3 331 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 BFARQ9NZS9 450 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 COX16Q9P0S2 106 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SH3BP4Q9P0V3 963 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ARHGAP20Q9P2F6 1191 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RCOR3Q9P2K3 495 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ARHGAP28Q9P2N2 729 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DNMT3BQ9UBC3 853 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CPNE7Q9UBL6 633 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MORF4L1Q9UBU8 362 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TRHDEQ9UKU6 1024 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 COPS3Q9UNS2 423 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RUVBL2Q9Y230 463 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 LIPT1Q9Y234 373 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RUVBL1Q9Y265 456 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CRYL1Q9Y2S2 319 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SNX11Q9Y5W9 270 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ACTL7AQ9Y615 435 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CDY2AQ9Y6F7 541 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RNF215Q9Y6U7 377 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DUSP10Q9Y6W6 482 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PIAS3Q9Y6X2 628 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 HSPE1-MOB4S4R3N1 261 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 AHDC1Q5TGY3 1603 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MYH1P12882 1939 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MYH6P13533 1939 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MYH8P13535 1937 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ITGB4P16144 1822 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF609O15014 1411 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PARP4Q9UKK3 1724 aaKnown RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FLT4P35916 1363 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 MYH2Q9UKX2 1941 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 COL16A1Q07092 1604 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PFASO15067 1338 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TRBV23OR9-2A0A075B6M9 112 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM265A0A087WTH1 108 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PMS2P1A4D2B8 440 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms