RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RPP40O75818 363 aaKnown RBP16.98■□□□□ 0.31
SPIDR-227ENST00000541342 PLOD1Q02809 727 aaPredicted RBP16.98■□□□□ 0.31
SPIDR-227ENST00000541342 CAMK1Q14012 370 aa16.98■□□□□ 0.31
SPIDR-227ENST00000541342 CAPRIN1Q14444 709 aaKnown RBP16.98■□□□□ 0.31
SPIDR-227ENST00000541342 KCTD21Q4G0X4 260 aa16.98■□□□□ 0.31
SPIDR-227ENST00000541342 ATXN7L2Q5T6C5 722 aaPredicted RBP16.98■□□□□ 0.31
SPIDR-227ENST00000541342 INTS11Q5TA45 600 aaKnown RBP16.98■□□□□ 0.31
SPIDR-227ENST00000541342 LPCAT1Q8NF37 534 aa16.98■□□□□ 0.31
SPIDR-227ENST00000541342 ZUFSPQ96AP4 578 aa16.98■□□□□ 0.31
SPIDR-227ENST00000541342 ISOC1Q96CN7 298 aa16.98■□□□□ 0.31
SPIDR-227ENST00000541342 TRMOQ9BU70 441 aa16.98■□□□□ 0.31
SPIDR-227ENST00000541342 C5orf42Q9H799 3197 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 A0A1B0GTL3 188 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 MOSPD3O75425 235 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 CDK14O94921 469 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 SIX3O95343 332 aaPredicted RBP16.97■□□□□ 0.31
SPIDR-227ENST00000541342 PRSS56P0CW18 603 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 CES1P23141 567 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 MYF6P23409 242 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 HERVK_113P63132 956 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 NFKB2Q00653 900 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 DCAF4L2Q8NA75 395 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 ERVK-6Q9BXR3 956 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 TUBB1Q9H4B7 451 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 AURKCQ9UQB9 309 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 PFDN1O60925 122 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 MYOGP15173 224 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 ATP6V0D1P61421 351 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 TBCELQ5QJ74 424 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 ELMSAN1Q6PJG2 1045 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 RPL10LQ96L21 214 aaKnown RBP16.97■□□□□ 0.31
SPIDR-227ENST00000541342 KCNA7Q96RP8 456 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 CDC14AQ9UNH5 594 aa16.97■□□□□ 0.31
SPIDR-227ENST00000541342 DHRS12A0PJE2 317 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ACOX3O15254 700 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 SMAD6O43541 496 aaKnown RBP16.96■□□□□ 0.31
SPIDR-227ENST00000541342 CLIC3O95833 236 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 BMP1P13497 986 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 SLC6A2P23975 617 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 LMAN2Q12907 356 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ADAMTS16Q8TE57 1224 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 NSUN5Q96P11 429 aaKnown RBP16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ADI1Q9BV57 179 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 NLE1Q9NVX2 485 aaPredicted RBP16.96■□□□□ 0.31
SPIDR-227ENST00000541342 RIMKLBQ9ULI2 386 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ZNF510Q9Y2H8 683 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 TRANK1O15050 2925 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 A0A0U1RQS6 177 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 CD3EAPO15446 510 aaKnown RBP16.96■□□□□ 0.31
SPIDR-227ENST00000541342 TPST1O60507 370 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 CD70P32970 193 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 CCT8P50990 548 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 RHOAP61586 193 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ZNF549Q6P9A3 640 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 GLT6D1Q7Z4J2 308 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 GPR180Q86V85 440 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ADGRG5Q8IZF4 528 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 GPR150Q8NGU9 434 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 TSPAN17Q96FV3 270 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 CDKN2AIPNLQ96HQ2 116 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 HACD3Q9P035 362 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 CRYL1Q9Y2S2 319 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ANKRD66B4E2M5 251 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 PIP5K1BO14986 540 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 GLP2RO95838 553 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 HSD17B1P14061 328 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 EPHA5P54756 1037 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 TEAD2Q15562 447 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 SLC36A3Q495N2 470 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 MPPE1Q53F39 396 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 LCN8Q6JVE9 175 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 ZNF786Q8N393 782 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 PHOSPHO2Q8TCD6 241 aa16.96■□□□□ 0.31
SPIDR-227ENST00000541342 REV3LO60673 3130 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 BBIP1A8MTZ0 92 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 MTHFD2P13995 350 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 CD1DP15813 335 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 TAF1AQ15573 450 aaPredicted RBP16.95■□□□□ 0.3
SPIDR-227ENST00000541342 KIF19Q2TAC6 998 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 CLVS1Q8IUQ0 354 aaPredicted RBP16.95■□□□□ 0.3
SPIDR-227ENST00000541342 CLYBLQ8N0X4 340 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 MINDY1Q8N5J2 469 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 PACRGLQ8N7B6 248 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 OR4K2Q8NGD2 314 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 OR4L1Q8NH43 312 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 GABPB2Q8TAK5 448 aaPredicted RBP16.95■□□□□ 0.3
SPIDR-227ENST00000541342 INTS6Q9UL03 887 aaKnown RBP16.95■□□□□ 0.3
SPIDR-227ENST00000541342 OAZ3Q9UMX2 235 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 AQP12BA6NM10 295 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 EPCAMP16422 314 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 ENTPD1P49961 510 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 MERTKQ12866 999 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 OR4D1Q15615 310 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 MPP7Q5T2T1 576 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 AQP12AQ8IXF9 295 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 PCYOX1LQ8NBM8 494 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 FNDC8Q8TC99 324 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 EXT2Q93063 718 aa16.95■□□□□ 0.3
SPIDR-227ENST00000541342 C12orf43Q96C57 262 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms