RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 MID1O15344 667 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 ENO1P06733 434 aaKnown RBP12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 KRT16P08779 473 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 C6P13671 934 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 AKT1P31749 480 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 PPARGP37231 505 aaPredicted RBP12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 KIR2DL1P43626 348 aaPredicted RBP12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 CTSCP53634 463 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 BTKQ06187 659 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 TGFBIQ15582 683 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 PIP5KL1Q5T9C9 394 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 ZDHHC20Q5W0Z9 365 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 KIAA1211LQ6NV74 962 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 ERAP2Q6P179 960 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 FBXL19Q6PCT2 694 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 MBOAT1Q6ZNC8 495 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 GPSM1Q86YR5 675 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 TRPC4APQ8TEL6 797 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 UCMAQ8WVF2 138 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 ULK4Q96C45 1275 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 AP2M1Q96CW1 435 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 DTD2Q96FN9 168 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 TTC1Q99614 292 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 SLC6A17Q9H1V8 727 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 STN1Q9H668 368 aaKnown RBP12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 SLC40A1Q9NP59 571 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 LMCD1Q9NZU5 365 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 EIF2B4Q9UI10 523 aaKnown RBP12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 ZNF225Q9UK10 706 aa12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.09□□□□□ -0.47
AP003559.1-201ENST00000540906 DOCK9Q9BZ29 2069 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 OR2AG2A6NM03 316 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 WNT9AO14904 365 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 TAPBPO15533 448 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 RECQL5O94762 991 aaPredicted RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 ATP1B2P14415 290 aaPredicted RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 NQO1P15559 274 aaKnown RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 AOAHP28039 575 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 SERPINB5P36952 375 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 TAS2R38P59533 333 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 CREB5Q02930 508 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 KRT72Q14CN4 511 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 LILRA3Q8N6C8 439 aaPredicted RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 POU5F2Q8N7G0 328 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF513Q8N8E2 541 aaPredicted RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 RASGEF1AQ8N9B8 481 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 DDHD1Q8NEL9 900 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF483Q8TF39 744 aaPredicted RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 BTN2A2Q8WVV5 523 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 KLHL29Q96CT2 875 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 NSL1Q96IY1 281 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 LRMDAQ9H2I8 198 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 SEMA4BQ9NPR2 832 aaPredicted RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 ARHGEF3Q9NR81 526 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 LATS2Q9NRM7 1088 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 TXLNGQ9NUQ3 528 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 SPATS2LQ9NUQ6 558 aaKnown RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 PCTPQ9UKL6 214 aa12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 APOBEC2Q9Y235 224 aaKnown RBP12.08□□□□□ -0.48
AP003559.1-201ENST00000540906 A8MUI8 341 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 EGFP01133 1207 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 COL9A1P20849 921 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 MAGEA9P43362 315 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CLCQ05315 142 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 GBX1Q14549 363 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CHPFQ8IZ52 775 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 FOXJ1Q92949 421 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 GLYATL1Q969I3 302 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 C3orf30Q96M34 536 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 P2RY13Q9BPV8 354 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF385DQ9H6B1 395 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 MID1IP1Q9NPA3 183 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 TCF7L2Q9NQB0 619 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CD274Q9NZQ7 290 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 GIMAP2Q9UG22 337 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 TRAF6Q9Y4K3 522 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 FADS3Q9Y5Q0 445 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CCDC22O60826 627 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 GUCA1CO95843 209 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 NCF2P19878 526 aaPredicted RBP12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 DGKAP23743 735 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 CTHP32929 405 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 SATB1Q01826 763 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 ZXDCQ2QGD7 858 aaPredicted RBP12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF284Q2VY69 593 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM52BQ4KMG9 183 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 SYVN1Q86TM6 617 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 MYO1HQ8N1T3 1032 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 DCBLD1Q8N8Z6 715 aa12.07□□□□□ -0.48
AP003559.1-201ENST00000540906 PLA2G15Q8NCC3 412 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms