RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CCDC97Q96F63 343 aaPredicted RBP15.25■□□□□ 0.03
DDB1-218ENST00000540784 LINC00615Q96LM1 132 aaPredicted RBP15.25■□□□□ 0.03
DDB1-218ENST00000540784 APOLD1Q96LR9 279 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 WDR83Q9BRX9 315 aaKnown RBP15.25■□□□□ 0.03
DDB1-218ENST00000540784 FAM167BQ9BTA0 163 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 PHACTR1Q9C0D0 580 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 OSGEPL1Q9H4B0 414 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 VPS37BQ9H9H4 285 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 IARS2Q9NSE4 1012 aaKnown RBP15.25■□□□□ 0.03
DDB1-218ENST00000540784 EVA1BQ9NVM1 165 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 SIRPGQ9P1W8 387 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 VPS9D1Q9Y2B5 631 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 PRSS21Q9Y6M0 314 aa15.25■□□□□ 0.03
DDB1-218ENST00000540784 TDRD6O60522 2096 aaKnown RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 PIEZO1Q92508 2521 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 C17orf113A0A1B0GUU1 675 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 B4DGG1 531 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 PRMT5O14744 637 aaPredicted RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 TNFSF14O43557 240 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 S1PR4O95977 384 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 CKMT2P17540 419 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 PBLDP30039 288 aaPredicted RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 PRLHRP49683 370 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 DUSP3P51452 185 aaPredicted RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 DAB2P98082 770 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 CTBP1Q13363 440 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 FRG1Q14331 258 aaKnown RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 NR0B2Q15466 257 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 TYSND1Q2T9J0 566 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 PROX2Q3B8N5 592 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 ZNF470Q6ECI4 717 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 PTRHD1Q6GMV3 140 aaKnown RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 C3orf62Q6ZUJ4 267 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 CFAP206Q8IYR0 622 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 GSDMBQ8TAX9 411 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 CERS2Q96G23 380 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 PLAC1Q9HBJ0 212 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 INTS10Q9NVR2 710 aaKnown RBP15.24■□□□□ 0.03
DDB1-218ENST00000540784 TBC1D29Q9UFV1 150 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 CABIN1Q9Y6J0 2220 aa15.24■□□□□ 0.03
DDB1-218ENST00000540784 TRBV23OR9-2A0A075B6M9 112 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 UBA6A0AVT1 1052 aaPredicted RBP15.23■□□□□ 0.03
DDB1-218ENST00000540784 KCNK5O95279 499 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 FTH1P02794 183 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 GSTA2P09210 222 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 GSTM1P09488 218 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 CKMT1AP12532 417 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 MYF5P13349 255 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 FMO4P31512 558 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 ID4P47928 161 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 NOVA1P51513 510 aaKnown RBP15.23■□□□□ 0.03
DDB1-218ENST00000540784 GSTM4Q03013 218 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 DMPKQ09013 629 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 METRNLQ641Q3 311 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 ZNF449Q6P9G9 518 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 GLRX5Q86SX6 157 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 DENND6AQ8IWF6 608 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 ARL10Q8N8L6 244 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 BAHD1Q8TBE0 780 aaPredicted RBP15.23■□□□□ 0.03
DDB1-218ENST00000540784 C9orf72Q96LT7 481 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 FMO2Q99518 471 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 TSSK1BQ9BXA7 367 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 P2RY12Q9H244 342 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 PRDM8Q9NQV8 689 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 MOCS1Q9NZB8 636 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 FBXO5Q9UKT4 447 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 ACSL5Q9ULC5 683 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 PADI4Q9UM07 663 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 CRYL1Q9Y2S2 319 aa15.23■□□□□ 0.03
DDB1-218ENST00000540784 ZNF106Q9H2Y7 1883 aaKnown RBP15.23■□□□□ 0.03
DDB1-218ENST00000540784 CPED1A4D0V7 1026 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 OR5K4A6NMS3 321 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 PDZK1P1A8MUH7 402 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 TRIM16O95361 564 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 EML2O95834 649 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 SLC2A4P14672 509 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 RPS3P23396 243 aaKnown RBP eCLIP15.22■□□□□ 0.034e-7■■■□□ 18.5
DDB1-218ENST00000540784 RPL10P27635 214 aaKnown RBP15.22■□□□□ 0.03
DDB1-218ENST00000540784 SSTR1P30872 391 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 EIF3BP55884 814 aaKnown RBP15.22■□□□□ 0.03
DDB1-218ENST00000540784 MGAT5Q09328 741 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 BIRC2Q13490 618 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 NFE2L1Q14494 772 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 C14orf28Q4W4Y0 310 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 TEDDM1Q5T9Z0 273 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 AGAP9Q5VTM2 703 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 TRMT10BQ6PF06 316 aaKnown RBP15.22■□□□□ 0.03
DDB1-218ENST00000540784 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 ABRAXAS1Q6UWZ7 409 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 WASH2PQ6VEQ5 465 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 FAM83HQ6ZRV2 1179 aaPredicted RBP15.22■□□□□ 0.03
DDB1-218ENST00000540784 CAPN12Q6ZSI9 719 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 SLC35F3Q8IY50 421 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 GPR156Q8NFN8 814 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 LPGAT1Q92604 370 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 WASH6PQ9NQA3 447 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 FBXO6Q9NRD1 293 aaPredicted RBP15.22■□□□□ 0.03
DDB1-218ENST00000540784 FAM8A1Q9UBU6 413 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
DDB1-218ENST00000540784 NFU1Q9UMS0 254 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms