RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TSTQ16762 297 aaKnown RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 TMEM95Q3KNT9 176 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 GTDC1Q4AE62 458 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 FASTKD5Q7L8L6 764 aaKnown RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 RNF168Q8IYW5 571 aaPredicted RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 TMTC2Q8N394 836 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 SLC38A9Q8NBW4 561 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 SGCDQ92629 289 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 GAD1Q99259 594 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 SEPT5Q99719 369 aaPredicted RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 PELI2Q9HAT8 420 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 FGF22Q9HCT0 170 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 SIX2Q9NPC8 291 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 C9orf78Q9NZ63 289 aaPredicted RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 EHD2Q9NZN4 543 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 ARID4BQ4LE39 1312 aaPredicted RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 OR6C76A6NM76 312 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 TRMUO75648 421 aaKnown RBP3.31□□□□□ -1.88
MDM2-227ENST00000540709 NGFP01138 241 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 MMP15P51511 669 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 LUMP51884 338 aaPredicted RBP3.31□□□□□ -1.88
MDM2-227ENST00000540709 SNRPD1P62314 119 aaKnown RBP3.31□□□□□ -1.88
MDM2-227ENST00000540709 NIPAL4Q0D2K0 466 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 PRKAA1Q13131 559 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 RRS1Q15050 365 aaKnown RBP3.31□□□□□ -1.88
MDM2-227ENST00000540709 ZDHHC20Q5W0Z9 365 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 ALS2CLQ60I27 953 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 TMEM198Q66K66 360 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 ACSM2BQ68CK6 577 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 ARHGAP12Q8IWW6 846 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 OR2T6Q8NHC8 308 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 ELMOD3Q96FG2 381 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 LINC00479Q96M42 142 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 TBATAQ96M53 351 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 ASCL2Q99929 193 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 SLC26A6Q9BXS9 759 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 UBXN6Q9BZV1 441 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 WDR13Q9H1Z4 485 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 MIOSQ9NXC5 875 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 RCC2Q9P258 522 aaKnown RBP3.31□□□□□ -1.88
MDM2-227ENST00000540709 RASAL2Q9UJF2 1139 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 PNMA2Q9UL42 364 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 GTF2A1LQ9UNN4 478 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 RABGAP1Q9Y3P9 1069 aa3.31□□□□□ -1.88
MDM2-227ENST00000540709 OR2M5A3KFT3 312 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 OGG1O15527 345 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 ARHGEF9O43307 516 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 HCRTR2O43614 444 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 SORBS2O94875 1100 aaKnown RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 EIF2S1P05198 315 aaKnown RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 TMEM11P17152 192 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 KRT9P35527 623 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 BSGP35613 385 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 RPS18P62269 152 aaKnown RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 SP3Q02447 781 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 EIF4A2Q14240 407 aaKnown RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 HSP90AB4PQ58FF6 505 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 GKAP1Q5VSY0 366 aaPredicted RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 BHLHB9Q6PI77 547 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 GLDNQ6ZMI3 551 aaPredicted RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 ISCA2Q86U28 154 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 GTSCR1Q86UQ5 136 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 EXOC8Q8IYI6 725 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 CRYBG2Q8N1P7 616 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 HJURPQ8NCD3 748 aaPredicted RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 SMPDL3BQ92485 455 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 ARHGEF2Q92974 986 aaKnown RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 C1orf74Q96LT6 269 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 DDOQ99489 341 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 GFI1Q99684 422 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 NCAPGQ9BPX3 1015 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 TRAF4Q9BUZ4 470 aaPredicted RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 DENND2DQ9H6A0 471 aaPredicted RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 MBNL1Q9NR56 388 aaKnown RBP3.3□□□□□ -1.88
MDM2-227ENST00000540709 TSPYL4Q9UJ04 414 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 MTMR6Q9Y217 621 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 SMAD5-AS1Q9Y6J3 95 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
MDM2-227ENST00000540709 TEX13DA0A0J9YY54 714 aaPredicted RBP3.29□□□□□ -1.88
MDM2-227ENST00000540709 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 PLEKHD1A6NEE1 506 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 SMAD9O15198 467 aaKnown RBP3.29□□□□□ -1.88
MDM2-227ENST00000540709 GPR137BO60478 399 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 DAB1O75553 588 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 CCNDBP1O95273 360 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 GCNT3O95395 438 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 RARGP13631 454 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 LIFP15018 202 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 ZNF10P21506 573 aaPredicted RBP3.29□□□□□ -1.88
MDM2-227ENST00000540709 CEACAM8P31997 349 aaPredicted RBP3.29□□□□□ -1.88
MDM2-227ENST00000540709 PPARGP37231 505 aaPredicted RBP3.29□□□□□ -1.88
MDM2-227ENST00000540709 GPR143P51810 404 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 THOP1P52888 689 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 PLA2G7Q13093 441 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 DENND5BQ6ZUT9 1274 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 CEP97Q8IW35 865 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 ZNF843Q8N446 348 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 SPEM1Q8N4L4 309 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 MAPK1IP1LQ8NDC0 245 aa3.29□□□□□ -1.88
MDM2-227ENST00000540709 OR2T12Q8NG77 320 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms