RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 WT1P19544 449 aaPredicted RBP8.85□□□□□ -0.99
LMO3-222ENST00000540445 PTPN7P35236 360 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 TSPAN7P41732 249 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 SEPHS1P49903 392 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 UBE2IP63279 158 aaKnown RBP8.85□□□□□ -0.99
LMO3-222ENST00000540445 PDE1BQ01064 536 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 MC2RQ01718 297 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 FOXM1Q08050 763 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 OLIG2Q13516 323 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 CLCA4Q14CN2 919 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 LONRF2Q1L5Z9 754 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 FNBP1LQ5T0N5 605 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 GPRC6AQ5T6X5 926 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 CEACAM20Q6UY09 585 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 WASH2PQ6VEQ5 465 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 ARHGEF18Q6ZSZ5 1173 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 ARHGAP22Q7Z5H3 698 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 CACNA2D3Q8IZS8 1091 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 LRRC57Q8N9N7 239 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 DTX3LQ8TDB6 740 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 NKD1Q969G9 470 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 PMEPA1Q969W9 287 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 DCUN1D1Q96GG9 259 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 SPATA13Q96N96 652 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 TGM7Q96PF1 710 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 PPP1R2P1Q96PQ5 205 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 TEFMQ96QE5 360 aaKnown RBP8.85□□□□□ -0.99
LMO3-222ENST00000540445 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 DDA1Q9BW61 102 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 UCK1Q9HA47 277 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 SLC40A1Q9NP59 571 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 WASH6PQ9NQA3 447 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 POT1Q9NUX5 634 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 FAM8A1Q9UBU6 413 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 CRLS1Q9UJA2 301 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 WDR37Q9Y2I8 494 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 KCTD3Q9Y597 815 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 PCDHGA3Q9Y5H0 932 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
LMO3-222ENST00000540445 SLC30A1Q9Y6M5 507 aa8.85□□□□□ -0.99
LMO3-222ENST00000540445 A0A0U1RQJ8 604 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 CAPN5O15484 640 aaPredicted RBP8.84□□□□□ -0.99
LMO3-222ENST00000540445 ZNF189O75820 626 aaPredicted RBP8.84□□□□□ -0.99
LMO3-222ENST00000540445 POLBP06746 335 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 RALBP11234 206 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 BRAFP15056 766 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 CA5AP35218 305 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 ADRA1AP35348 466 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 HADHAP40939 763 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 CTSCP53634 463 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 GFERP55789 205 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 CYP4F2P78329 520 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 GPR18Q14330 331 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 NFE2L1Q14494 772 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 KRT33BQ14525 404 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 GSE1Q14687 1217 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 PARP6Q2NL67 630 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 LINC00303Q3SY05 128 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 AGAP9Q5VTM2 703 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 IRGCQ6NXR0 463 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 FAM92BQ6ZTR7 304 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 C11orf96Q7Z7L8 435 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 RBM12BQ8IXT5 1001 aaKnown RBP8.84□□□□□ -0.99
LMO3-222ENST00000540445 CFAP206Q8IYR0 622 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 TAB3Q8N5C8 712 aaPredicted RBP8.84□□□□□ -0.99
LMO3-222ENST00000540445 BEND7Q8N7W2 519 aaPredicted RBP8.84□□□□□ -0.99
LMO3-222ENST00000540445 BMPERQ8N8U9 685 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 FAM71DQ8N9W8 422 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 DDHD1Q8NEL9 900 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 EXTL1Q92935 676 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 RTP4Q96DX8 246 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 ZDHHC12Q96GR4 267 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 ZNF514Q96K75 400 aaPredicted RBP8.84□□□□□ -0.99
LMO3-222ENST00000540445 C9orf72Q96LT7 481 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 ALS2CR12Q96Q35 445 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 GORASP1Q9BQQ3 440 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 ZPBPQ9BS86 351 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 FAM96AQ9H5X1 160 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 APMAPQ9HDC9 416 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 FBXO8Q9NRD0 319 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 CCDC88CQ9P219 2028 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 FKBPLQ9UIM3 349 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 GUCA1BQ9UMX6 200 aa8.84□□□□□ -0.99
LMO3-222ENST00000540445 PCM1Q15154 2024 aa8.83□□□□□ -1
LMO3-222ENST00000540445 ASH1LQ9NR48 2969 aaKnown RBP8.83□□□□□ -1
LMO3-222ENST00000540445 MGAT4DA6NG13 374 aa8.83□□□□□ -1
LMO3-222ENST00000540445 PRR19A6NJB7 356 aa8.83□□□□□ -1
LMO3-222ENST00000540445 GAPDHSO14556 408 aaPredicted RBP8.83□□□□□ -1
LMO3-222ENST00000540445 PSMD3O43242 534 aa8.83□□□□□ -1
LMO3-222ENST00000540445 RAD1O60671 282 aa8.83□□□□□ -1
LMO3-222ENST00000540445 C9P02748 559 aa8.83□□□□□ -1
LMO3-222ENST00000540445 LIFP15018 202 aa8.83□□□□□ -1
LMO3-222ENST00000540445 TPH1P17752 444 aa8.83□□□□□ -1
LMO3-222ENST00000540445 ITGALP20701 1170 aa8.83□□□□□ -1
LMO3-222ENST00000540445 MAP4P27816 1152 aaKnown RBP8.83□□□□□ -1
LMO3-222ENST00000540445 CDC25BP30305 580 aa8.83□□□□□ -1
LMO3-222ENST00000540445 LEPRP48357 1165 aaKnown RBP8.83□□□□□ -1
LMO3-222ENST00000540445 LMAN1P49257 510 aa8.83□□□□□ -1
LMO3-222ENST00000540445 PLCL1Q15111 1095 aa8.83□□□□□ -1
LMO3-222ENST00000540445 RPE65Q16518 533 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms