RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 PPM1MQ96MI6 270 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 CCDC115Q96NT0 180 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 PTPN18Q99952 460 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 RBM4BQ9BQ04 359 aaKnown RBP11.09□□□□□ -0.63
CPT1A-206ENST00000540367 RBM4Q9BWF3 364 aaKnown RBP11.09□□□□□ -0.63
CPT1A-206ENST00000540367 C1QTNF3Q9BXJ4 246 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 UGT2B28Q9BY64 529 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 DERL2Q9GZP9 239 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 CARS2Q9HA77 564 aaKnown RBP11.09□□□□□ -0.63
CPT1A-206ENST00000540367 FBXO8Q9NRD0 319 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 PAK1IP1Q9NWT1 392 aaPredicted RBP11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SMPD4Q9NXE4 827 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 ZNF225Q9UK10 706 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 ANKRD12Q6UB98 2062 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 GBF1Q92538 1859 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 WASH4PA8MWX3 477 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 ARNTLO00327 626 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 TOR1BO14657 336 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 STX16O14662 325 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 AXIN1O15169 862 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 MSI1O43347 362 aaKnown RBP11.09□□□□□ -0.63
CPT1A-206ENST00000540367 NOBOXO60393 691 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 KATNA1O75449 491 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SOAT2O75908 522 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 IST1P53990 364 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SLC10A7Q0GE19 358 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 MARC1Q5VT66 337 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SCIMPQ6UWF3 145 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 C14orf80Q86SX3 495 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SNX29P2Q8IUI4 249 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 FAM86B1Q8N7N1 296 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 NAT16Q8N8M0 369 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 FNDC5Q8NAU1 212 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 OR6J1Q8NGC5 347 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 PEX13Q92968 403 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 FATE1Q969F0 183 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 CGREF1Q99674 301 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SMOC2Q9H3U7 446 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 SYTL2Q9HCH5 934 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 UXTQ9UBK9 157 aaPredicted RBP11.09□□□□□ -0.63
CPT1A-206ENST00000540367 PCTPQ9UKL6 214 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 IKZF3Q9UKT9 509 aa11.09□□□□□ -0.63
CPT1A-206ENST00000540367 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 DOCK3Q8IZD9 2030 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 SYCE1LA8MT33 242 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 J3KR12 359 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 GMNNO75496 209 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 OXSR1O95747 527 aaPredicted RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 MLYCDO95822 493 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 CST1P01037 141 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 PABPC1P11940 636 aaKnown RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 OGNP20774 298 aaKnown RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 PCSK1P29120 753 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 ISL1P61371 349 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 TSNQ15631 228 aaKnown RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 INAQ16352 499 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 DEPDC1Q5TB30 811 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 FAR1Q8WVX9 515 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 LPPQ93052 612 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 ZNF566Q969W8 418 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 TADA1Q96BN2 335 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 ERLEC1Q96DZ1 483 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 KLHL5Q96PQ7 755 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 ACOX2Q99424 681 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 HERC2P3Q9BVR0 1158 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 AGO3Q9H9G7 860 aaKnown RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 NECTIN3Q9NQS3 549 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 HEBP1Q9NRV9 189 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 SACM1LQ9NTJ5 587 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 CATSPERZQ9NTU4 200 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 PCDHGB1Q9Y5G3 927 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 HS3ST4Q9Y661 456 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 LOC100130705A0A1B0GUX0 176 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 LOC285095A0A1B0GVY8 99 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 LCHNA4D1U4 455 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 PFDN6O15212 129 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 TREHO43280 583 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 MOCS2O96007 188 aaPredicted RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 CHRNA1P02708 482 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 CCDC159P0C7I6 412 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 BMP4P12644 408 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 SERPINB10P48595 397 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 STC1P52823 247 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 BEX3Q00994 111 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 PWP1Q13610 501 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 ACOX1Q15067 660 aa11.08□□□□□ -0.64
CPT1A-206ENST00000540367 MAPRE1Q15691 268 aaKnown RBP11.08□□□□□ -0.64
CPT1A-206ENST00000540367 GPR162Q16538 588 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms