RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TLR10Q9BXR5 811 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 AKIRIN1Q9H9L7 192 aaPredicted RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 CHKBQ9Y259 395 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 SLC30A1Q9Y6M5 507 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 PRRC2CQ9Y520 2896 aaKnown RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 SHANK1Q9Y566 2161 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 A0A0J9YYE9 177 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 A6NCN8 305 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 POLR1CO15160 346 aaPredicted RBP14.71□□□□□ -0.05
USB1-203ENST00000539737 KCNN4O15554 427 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 SEMA7AO75326 666 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 KIAA0754O94854 1291 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 TIAF1O95411 115 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 CLDN7O95471 211 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 TRBC1P01850 177 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 NFKB1P19838 968 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 PPP1CAP62136 330 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 RPS18P62269 152 aaKnown RBP14.71□□□□□ -0.05
USB1-203ENST00000539737 ABHD18Q0P651 414 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 SEPT7Q16181 437 aaKnown RBP14.71□□□□□ -0.05
USB1-203ENST00000539737 CPZQ66K79 652 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 ASB18Q6ZVZ8 466 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 ZNF765Q7L2R6 523 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 PID1Q7Z2X4 250 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 RAVER1Q8IY67 606 aaKnown RBP14.71□□□□□ -0.05
USB1-203ENST00000539737 ZNF567Q8N184 647 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 MAIP1Q8WWC4 291 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 TADA1Q96BN2 335 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 COX14Q96I36 57 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 TGM7Q96PF1 710 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 PPP1R2P1Q96PQ5 205 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 FCRL5Q96RD9 977 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 FAM118BQ9BPY3 351 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 ULBP3Q9BZM4 244 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 GBA3Q9H227 469 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 PLEKHB1Q9UF11 243 aaPredicted RBP14.71□□□□□ -0.05
USB1-203ENST00000539737 FAM153AQ9UHL3 310 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 TLK1Q9UKI8 766 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 MED13Q9UHV7 2174 aa14.71□□□□□ -0.05
USB1-203ENST00000539737 CSMD1Q96PZ7 3565 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 CD68P34810 354 aaPredicted RBP14.7□□□□□ -0.06
USB1-203ENST00000539737 STC1P52823 247 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 NADK2Q4G0N4 442 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 CCDC70Q6NSX1 233 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 IYDQ6PHW0 289 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 CRTC3Q6UUV7 619 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 TEX19Q8NA77 164 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 SLC35B2Q8TB61 432 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 SPATA13Q96N96 652 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 TEFMQ96QE5 360 aaKnown RBP14.7□□□□□ -0.06
USB1-203ENST00000539737 FBXO8Q9NRD0 319 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 TRMT1Q9NXH9 659 aaKnown RBP14.7□□□□□ -0.06
USB1-203ENST00000539737 PKD2L2Q9NZM6 624 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 R3HDM2Q9Y2K5 976 aaKnown RBP14.7□□□□□ -0.06
USB1-203ENST00000539737 ZKSCAN5Q9Y2L8 839 aa14.7□□□□□ -0.06
USB1-203ENST00000539737 HIVEP3Q5T1R4 2406 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 TCRBV7S2A1N4TA0A589 114 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 ANXA9O76027 345 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 AGFG2O95081 481 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 PRLP01236 227 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 CD97P48960 835 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 CDK18Q07002 472 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 MPP3Q13368 585 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 PCSK7Q16549 785 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 ZNF569Q5MCW4 686 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 FAM69BQ5VUD6 431 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 ALS2CLQ60I27 953 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 ZNF787Q6DD87 383 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 WDR74Q6RFH5 385 aaPredicted RBP14.69□□□□□ -0.06
USB1-203ENST00000539737 CERS6Q6ZMG9 384 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 NLRP8Q86W28 1048 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 SPATA22Q8NHS9 363 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 PLEKHG4BQ96PX9 1271 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 TRIB3Q96RU7 358 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 LYSMD1Q96S90 227 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 SRPK1Q96SB4 655 aaKnown RBP14.69□□□□□ -0.06
USB1-203ENST00000539737 MLPHQ9BV36 600 aaPredicted RBP14.69□□□□□ -0.06
USB1-203ENST00000539737 OSGEPL1Q9H4B0 414 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 STN1Q9H668 368 aaKnown RBP14.69□□□□□ -0.06
USB1-203ENST00000539737 C10orf88Q9H8K7 445 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 CPNE7Q9UBL6 633 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 SLC23A2Q9UGH3 650 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 LNPEPQ9UIQ6 1025 aa14.69□□□□□ -0.06
USB1-203ENST00000539737 C1orf232A0A0U1RR37 186 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ANKRD66B4E2M5 251 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 CAPN5O15484 640 aaPredicted RBP14.68□□□□□ -0.06
USB1-203ENST00000539737 LIASO43766 372 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 CEP104O60308 925 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 PMPCBO75439 489 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 NDST3O95803 873 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 MT-CYBP00156 380 aaPredicted RBP14.68□□□□□ -0.06
USB1-203ENST00000539737 FGGP02679 453 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 SLC4A1P02730 911 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ZNF8P17098 575 aaPredicted RBP14.68□□□□□ -0.06
USB1-203ENST00000539737 GEMP55040 296 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 LRP8Q14114 963 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 SEPT6Q14141 434 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 GALNT3Q14435 633 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms