RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 AKTIPQ9H8T0 292 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 DEC1Q9P2X7 70 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 VTI1BQ9UEU0 232 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 HCN2Q9UL51 889 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 PPIL1Q9Y3C6 166 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 K7ESM1 405 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 E2F3O00716 465 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 AZIN1O14977 448 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
ACTN1-205ENST00000538545 XPAP23025 273 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-205ENST00000538545 ADARP55265 1226 aaKnown RBP13.92□□□□□ -0.18
ACTN1-205ENST00000538545 HYAL1Q12794 435 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 RALGDSQ12967 914 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 PAOXQ6QHF9 649 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 CEP70Q8NHQ1 597 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 PANX3Q96QZ0 392 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 EGFL8Q99944 293 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 ZNF385DQ9H6B1 395 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 MEAF6Q9HAF1 191 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 UPK3BL1B0FP48 263 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 UPK3BL2E5RIL1 263 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 RPS17P08708 135 aaKnown RBP13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ST8SIA6P61647 398 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ZNF234Q14588 700 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 PARM1Q6UWI2 310 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 LAYNQ6UX15 382 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 RTL10Q7L3V2 364 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
ACTN1-205ENST00000538545 SUN2Q9UH99 717 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ZMYM5Q9UJ78 669 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 RGSL1A5PLK6 1076 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 FFAR2O15552 330 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ENO3P13929 434 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-205ENST00000538545 DPP6P42658 865 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 HTR6P50406 440 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 PKNOX1P55347 436 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 RIPOR1Q6ZS17 1223 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 MMAAQ8IVH4 418 aaKnown RBP13.91□□□□□ -0.18
ACTN1-205ENST00000538545 CMTM5Q96DZ9 223 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 FAM83DQ9H4H8 585 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ZDHHC3Q9NYG2 299 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 DPP7Q9UHL4 492 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 TRPC5OSA6NMA1 111 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 AGAP14A8MT82 685 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 SLCO1B7G3V0H7 640 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 TAPBPO15533 448 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-205ENST00000538545 SPINT1O43278 529 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 IL12RB1P42701 662 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 LCP2Q13094 533 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 RIPK1Q13546 671 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 DMC1Q14565 340 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ACOX1Q15067 660 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ZXDCQ2QGD7 858 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 CLYBLQ8N0X4 340 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 LMNTD1Q8N9Z9 388 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 FAM156AQ8NDB6 213 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 ARRDC3Q96B67 414 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 PYCR2Q96C36 320 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 TUBGCP3Q96CW5 907 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 SORCS3Q9UPU3 1222 aa13.91□□□□□ -0.18
ACTN1-205ENST00000538545 TRPM6Q9BX84 2022 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 SYCE1LA8MT33 242 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 UBDO15205 165 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 CCNT2O60583 730 aaKnown RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 GPC4O75487 556 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 CRCPO75575 148 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 TM7SF2O76062 418 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 TCN1P20061 433 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 PBLDP30039 288 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 NSG1P42857 185 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 CTSCP53634 463 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 DIO3P55073 304 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 ERVPABLB-1P60509 514 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 POLR2LP62875 67 aaKnown RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 AAK1Q2M2I8 961 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 AGKQ53H12 422 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 C9orf64Q5T6V5 341 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 METTL21CQ5VZV1 264 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 PDE12Q6L8Q7 609 aaKnown RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 BRAT1Q6PJG6 821 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 LARP4Q71RC2 724 aaKnown RBP eCLIP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 MYO1HQ8N1T3 1032 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 CFAP61Q8NHU2 1237 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 SLC39A3Q9BRY0 314 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 C1orf50Q9BV19 199 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 FFAR3O14843 346 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 GPR42O15529 346 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 ELFN1P0C7U0 828 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 VIPR1P32241 457 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 GJA4P35212 333 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 OPRD1P41143 372 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 YBX1P67809 324 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms