RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PRUNE1Q86TP1 453 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SLC9B2Q86UD5 537 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TRAPPC5Q8IUR0 188 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 RASGEF1AQ8N9B8 481 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 OR4D9Q8NGE8 314 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 OR13C4Q8NGS5 318 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ZNF398Q8TD17 642 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CCDC74BQ96LY2 380 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 KRT12Q99456 494 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PRORYQ9H606 182 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PISDQ9UG56 409 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 FKBPLQ9UIM3 349 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PCDHGA7Q9Y5G6 932 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 THRAP10827 490 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 BRAFP15056 766 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SLC5A2P31639 672 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 XIAPP98170 497 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 GTF2H3Q13889 308 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DHX34Q14147 1143 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TRIP13Q15645 432 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TAB3Q8N5C8 712 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TTC25Q96NG3 672 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 STN1Q9H668 368 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 RAB6BQ9NRW1 208 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ZNF624Q9P2J8 865 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
TNFRSF1A-209ENST00000536717 E7EVH7 732 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PSMD3O43242 534 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LDB2O43679 373 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DUX1O43812 170 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SRP72O76094 671 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CRTAMO95727 393 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 XRCC1P18887 633 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 MPSTP25325 297 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 RPL10P27635 214 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SLC19A1P41440 591 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 VPS41P49754 854 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ZNF140P52738 457 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SEPT7Q16181 437 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TMEM71Q6P5X7 295 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ABRAXAS1Q6UWZ7 409 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 MAATS1Q7Z4T9 603 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CEP112Q8N8E3 955 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 OR10G6Q8NH81 332 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SH3KBP1Q96B97 665 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AHCYL2Q96HN2 611 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DPYSL5Q9BPU6 564 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TBC1D10AQ9BXI6 508 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DPH1Q9BZG8 443 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ZCCHC2Q9C0B9 1178 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ETNK1Q9HBU6 452 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PDP2Q9P2J9 529 aa17.56■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CTAGE15A4D2H0 777 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ERI2A8K979 691 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AGAP14A8MT82 685 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PDZK1P1A8MUH7 402 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 HGSO14964 777 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 KLK10O43240 276 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CTAGE8P0CG41 777 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LMAN1P49257 510 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 EPHA4P54764 986 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 BASP1P80723 227 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PDE1BQ01064 536 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 GPS1Q13098 491 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TRA2AQ13595 282 aaKnown RBP eCLIP17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TMEM220Q6QAJ8 160 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 WASH2PQ6VEQ5 465 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CTAGE6Q86UF2 777 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 JAMLQ86YT9 394 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CTAGE4Q8IX94 777 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CCDC97Q96F63 343 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 C19orf43Q9BQ61 176 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ASB8Q9H765 288 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LRRC40Q9H9A6 602 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 WASH6PQ9NQA3 447 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ACSL6Q9UKU0 697 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 NEU2Q9Y3R4 380 aa17.55■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LILRA5A6NI73 299 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 OR2AG2A6NM03 316 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AP2A1O95782 977 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CCL4P13236 92 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 IDSP22304 550 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PTGIRP43119 386 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 MAPK10P53779 464 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DRG2P55039 364 aaKnown RBP17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TMPRSS15P98073 1019 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DMPKQ09013 629 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SEMA5AQ13591 1074 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PTK6Q13882 451 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AGAP9Q5VTM2 703 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AVL9Q8NBF6 648 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 FCRL3Q96P31 734 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ASIC3Q9UHC3 531 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 WDR37Q9Y2I8 494 aa17.54■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PRAMEF33A0A0G2JMD5 474 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms