RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TAS2R42Q7RTR8 314 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 PIM3Q86V86 326 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 FBXO39Q8N4B4 442 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 GPR150Q8NGU9 434 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ANP32BQ92688 251 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 FGF11Q92914 225 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 MAGOHBQ96A72 148 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ULK4Q96C45 1275 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 CRELD1Q96HD1 420 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 SLC46A1Q96NT5 459 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 COPS8Q99627 209 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 C19orf43Q9BQ61 176 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 WASH6PQ9NQA3 447 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ZDHHC3Q9NYG2 299 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 OGFRQ9NZT2 677 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 RALYQ9UKM9 306 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 PSMD13Q9UNM6 376 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 PRSS21Q9Y6M0 314 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 IGLV3-16A0A075B6K0 115 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 A0A087WV48 116 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 OR5K4A6NMS3 321 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 PGRMC1O00264 195 aaKnown RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 FANCGO15287 622 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 VIPP01282 170 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 SLC2A4P14672 509 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 VCLP18206 1134 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 MSNP26038 577 aaKnown RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 FOXN2P32314 431 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 COILP38432 576 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 EIF2S3P41091 472 aaKnown RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 PRLHRP49683 370 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 CACNG1Q06432 222 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 SQSTM1Q13501 440 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 GPR33Q49SQ1 333 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 ANKRD22Q5VYY1 191 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 DUS1LQ6P1R4 473 aaKnown RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 IGF2-ASQ6U949 168 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 CLDN19Q8N6F1 224 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 HDAC10Q969S8 669 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 DCUN1D1Q96GG9 259 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF578Q96N58 590 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 RANBP9Q96S59 729 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 STRADBQ9C0K7 418 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 HOMER3Q9NSC5 361 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 PISDQ9UG56 409 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 NEU2Q9Y3R4 380 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 TCAF1Q9Y4C2 921 aa12.91□□□□□ -0.34
PRKDC-206ENST00000536429 CFAP20Q9Y6A4 193 aaKnown RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 DNMT3AQ9Y6K1 912 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-206ENST00000536429 HEATR9A2RTY3 570 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 MGAT4DA6NG13 374 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 LILRA5A6NI73 299 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 CDRT15L2A8MXV6 281 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 TMX2-CTNND1H3BSU7 103 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 KRT14P02533 472 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 THRAP10827 490 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 CCL4P13236 92 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ATP1B2P14415 290 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 TYRP1P17643 537 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ADRA1DP25100 572 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 RBMS1P29558 406 aaKnown RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 PPM1FP49593 454 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 LIMK2P53671 638 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ERVPABLB-1P60509 514 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 GPLD1P80108 840 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 CCDC173Q0VFZ6 552 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 GPS1Q13098 491 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 SEMA3AQ14563 771 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 KCNJ11Q14654 390 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 RPE65Q16518 533 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 SKIDA1Q1XH10 827 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF658BQ4V348 819 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 SNAP47Q5SQN1 464 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 METRNLQ641Q3 311 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 TRIM48Q8IWZ4 208 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 LSMEM2Q8N112 164 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 OR4D9Q8NGE8 314 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 OR2L2Q8NH16 312 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 OR10G6Q8NH81 332 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 NCSTNQ92542 709 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 AHCYL2Q96HN2 611 aaKnown RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF514Q96K75 400 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 LINC00615Q96LM1 132 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 RMDN2Q96LZ7 410 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ZMYND15Q9H091 742 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 WWP1Q9H0M0 922 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms