RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 LPOP22079 712 aaPredicted RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 UGT1A1P22309 533 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 UGT1A4P22310 534 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 MPSTP25325 297 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 SLC5A2P31639 672 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 UGT1A3P35503 534 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 ETV5P41161 510 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 ZNF140P52738 457 aaPredicted RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 CTSCP53634 463 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 LIMK2P53671 638 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 EPHA4P54764 986 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 CXADRP78310 365 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 TMEM115Q12893 351 aaPredicted RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 CLN3Q13286 438 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 TRA2AQ13595 282 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHD4-204ENST00000535810 ITGA9Q13797 1035 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 GTF2H3Q13889 308 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 SPARCL1Q14515 664 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 SEPT7Q16181 437 aaKnown RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 LDLRAP1Q5SW96 308 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 GPRC6AQ5T6X5 926 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 KCTD11Q693B1 232 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 ARHGEF18Q6ZSZ5 1173 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 JAMLQ86YT9 394 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 LRRC8AQ8IWT6 810 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 RASGEF1AQ8N9B8 481 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 AVL9Q8NBF6 648 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 CCDC112Q8NEF3 446 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 OR4K2Q8NGD2 314 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 OR10G6Q8NH81 332 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 GDAP1Q8TB36 358 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 BRSK1Q8TDC3 778 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 ATG4AQ8WYN0 398 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 SH3KBP1Q96B97 665 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 TTC25Q96NG3 672 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 DPYSL5Q9BPU6 564 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 TBL1YQ9BQ87 522 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 TMEM121Q9BTD3 319 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 CLMPQ9H6B4 373 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 UGT1A7Q9HAW7 530 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 UGT1A10Q9HAW8 530 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 UGT1A8Q9HAW9 530 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 FOXJ2Q9P0K8 574 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 PDP2Q9P2J9 529 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 CPNE7Q9UBL6 633 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 GUCA1BQ9UMX6 200 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 KCTD3Q9Y597 815 aa8.7□□□□□ -1.02
CHD4-204ENST00000535810 ZNF106Q9H2Y7 1883 aaKnown RBP8.7□□□□□ -1.02
CHD4-204ENST00000535810 LILRA5A6NI73 299 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 C2orf81A6NN90 581 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 PDZK1P1A8MUH7 402 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 C9orf172C9J069 976 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 RNF223E7ERA6 249 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 KRT86O43790 486 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 SRP72O76094 671 aaKnown RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 METTL18O95568 372 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 VCLP18206 1134 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 RPL10P27635 214 aaKnown RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 MAPK10P53779 464 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 DRG2P55039 364 aaKnown RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 UCNP55089 124 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 TMPRSS3P57727 454 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 XIAPP98170 497 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 DMPKQ09013 629 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 PARP6Q2NL67 630 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 P3H1Q32P28 736 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 AGAP9Q5VTM2 703 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 BROXQ5VW32 411 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 TMEM71Q6P5X7 295 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 WDR74Q6RFH5 385 aaPredicted RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 ABRAXAS1Q6UWZ7 409 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 WASH2PQ6VEQ5 465 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 GPR155Q7Z3F1 870 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 AGBL5Q8NDL9 886 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 ARMC2Q8NEN0 867 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 OR13C4Q8NGS5 318 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 ZNF398Q8TD17 642 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 USP7Q93009 1102 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 PMEPA1Q969W9 287 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 RTP4Q96DX8 246 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 AHCYL2Q96HN2 611 aaKnown RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 TBC1D10AQ9BXI6 508 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 KCNF1Q9H3M0 494 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 UCK1Q9HA47 277 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 ARNT2Q9HBZ2 717 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 CPNE5Q9HCH3 593 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 WASH6PQ9NQA3 447 aa8.69□□□□□ -1.02
CHD4-204ENST00000535810 AKAP7Q9P0M2 348 aaPredicted RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 ZNF624Q9P2J8 865 aaPredicted RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 FEZ2Q9UHY8 353 aaPredicted RBP8.69□□□□□ -1.02
CHD4-204ENST00000535810 BOD1L1Q8NFC6 3051 aa8.68□□□□□ -1.02
CHD4-204ENST00000535810 TEX51A0A1B0GUA7 166 aa8.68□□□□□ -1.02
CHD4-204ENST00000535810 OR2AG2A6NM03 316 aa8.68□□□□□ -1.02
CHD4-204ENST00000535810 OR52A4PA6NMU1 304 aa8.68□□□□□ -1.02
CHD4-204ENST00000535810 CCL22O00626 93 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms