RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CLPPQ16740 277 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 AGAP9Q5VTM2 703 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 TMEM220Q6QAJ8 160 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 SLC9B2Q86UD5 537 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 NXPE1Q8N323 547 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 LILRA3Q8N6C8 439 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 KCNE4Q8WWG9 221 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 SGF29Q96ES7 293 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 PBKQ96KB5 322 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 BBC3Q96PG8 261 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 SLC38A3Q99624 504 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 NLE1Q9NVX2 485 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 PDP2Q9P2J9 529 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 FEZ2Q9UHY8 353 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 PCDHGA7Q9Y5G6 932 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 MROH6A6NGR9 719 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 OR51F1A6NGY5 319 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 PDZK1P1A8MUH7 402 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 TMX2-CTNND1H3BSU7 103 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 H7C0S8 307 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 ZNF185O15231 689 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 POP7O75817 140 aaKnown RBP16.08■□□□□ 0.16
ATL3-202ENST00000535789 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
ATL3-202ENST00000535789 SUN1O94901 812 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 CRTAMO95727 393 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 IFNB1P01574 187 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 FGGP02679 453 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 FGF3P11487 239 aaPredicted RBP16.08■□□□□ 0.16
ATL3-202ENST00000535789 MC4RP32245 332 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 GFERP55789 205 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 BIRC2Q13490 618 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 SEMA5AQ13591 1074 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 GTF2H3Q13889 308 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 ZNF658BQ4V348 819 aaPredicted RBP16.08■□□□□ 0.16
ATL3-202ENST00000535789 CCDC38Q502W7 563 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 WASH2PQ6VEQ5 465 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 TMEM26Q6ZUK4 368 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 CREG2Q8IUH2 290 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 PIANPQ8IYJ0 282 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 RASGEF1CQ8N431 466 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 C19orf43Q9BQ61 176 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 FRMD8P1Q9BZ68 369 aaPredicted RBP16.08■□□□□ 0.16
ATL3-202ENST00000535789 WASH6PQ9NQA3 447 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 OCIAD1Q9NX40 245 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 ACSL6Q9UKU0 697 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 MRFAP1Q9Y605 127 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 MN1Q10571 1320 aaPredicted RBP16.08■□□□□ 0.16
ATL3-202ENST00000535789 ATRXP46100 2492 aa16.08■□□□□ 0.16
ATL3-202ENST00000535789 IGLV3-16A0A075B6K0 115 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 OR5K4A6NMS3 321 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 HGSO14964 777 aaPredicted RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 RRP8O43159 456 aaKnown RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 DUX1O43812 170 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 JMJD7P0C870 316 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 SLC2A4P14672 509 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 AKT1P31749 480 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 STIP1P31948 543 aaKnown RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 RPL22P35268 128 aaKnown RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 MAPK9P45984 424 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 MAPK10P53779 464 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 EPHA4P54764 986 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 SEPT6Q14141 434 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 GPR18Q14330 331 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 TGIF1Q15583 401 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 CCNG2Q16589 344 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 BCL7AQ4VC05 210 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 FNBP1LQ5T0N5 605 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 DUS1LQ6P1R4 473 aaKnown RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 TMEM71Q6P5X7 295 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 DRICH1Q6PGQ1 229 aaPredicted RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 SNX20Q7Z614 316 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 AMZ2Q86W34 360 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 BMPERQ8N8U9 685 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 OR13J1Q8NGT2 312 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 JPH3Q8WXH2 748 aaPredicted RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 RSC1A1Q92681 617 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 USP7Q93009 1102 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 ZNF778Q96MU6 729 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 ZCCHC2Q9C0B9 1178 aaKnown RBP16.07■□□□□ 0.16
ATL3-202ENST00000535789 CPNE5Q9HCH3 593 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 CRLS1Q9UJA2 301 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 CDC23Q9UJX2 597 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 PSMD13Q9UNM6 376 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 ZNF148Q9UQR1 794 aa16.07■□□□□ 0.16
ATL3-202ENST00000535789 KLK10O43240 276 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 MSH3P20585 1137 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 ITGALP20701 1170 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 IDSP22304 550 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 ACRV1P26436 265 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 FDFT1P37268 417 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 KCNJ1P48048 391 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 PRLHRP49683 370 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 PPP1CAP62136 330 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 PDE1BQ01064 536 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 TUBB2AQ13885 445 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 WDR74Q6RFH5 385 aaPredicted RBP16.06■□□□□ 0.16
ATL3-202ENST00000535789 LRRC69Q6ZNQ3 347 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 ZNF534Q76KX8 674 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 ARHGAP22Q7Z5H3 698 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms