RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ARL2P36404 184 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 MPP1Q00013 466 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CLCQ05315 142 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CHIT1Q13231 466 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 SPPL2CQ8IUH8 684 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 ALG3Q92685 438 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 SNX27Q96L92 541 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CCDC28BQ9BUN5 200 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 RSL24D1Q9UHA3 163 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 RAPGEFL1Q9UHV5 662 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 ERVK-11Q9UQG0 969 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 C8AP07357 584 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 L1CAMP32004 1257 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 FSTL1Q12841 308 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 DPYSQ14117 519 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC30A6Q6NXT4 461 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 ARHGAP22Q7Z5H3 698 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 RANBP3LQ86VV4 465 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 DPEP3Q9H4B8 488 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 CLEC4AQ9UMR7 237 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 SCAMP1O15126 338 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 SMPD1P17405 629 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 IGFBP5P24593 272 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 HSPB3Q12988 150 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 PPP2R2DQ66LE6 453 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 TCEAL6Q6IPX3 200 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 RASSF6Q6ZTQ3 369 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 YTHDF3Q7Z739 585 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 FBXO15Q8NCQ5 510 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC4A9Q96Q91 983 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 ELOVL7A1L3X0 281 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 BTN3A3O00478 584 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 C9P02748 559 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 ASLP04424 464 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 TCEA1P23193 301 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 CYP4F8P98187 520 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 CXorf57Q6NSI4 855 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 FRMD6Q96NE9 622 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 C11orf84Q9BUA3 381 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 PNPLA8Q9NP80 782 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 MAP2K7O14733 419 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 FAM155BO75949 473 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 EOMESO95936 686 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 GSTT1P30711 240 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 HNRNPH3P31942 346 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 BLKP51451 505 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 SCRN3Q0VDG4 424 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 KLF10Q13118 480 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 MEIOBQ8N635 442 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 OR5T3Q8NGG3 340 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 PIGXQ8TBF5 258 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 RASSF5Q8WWW0 418 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 PCDHGC3Q9UN70 934 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 B3GALT2O43825 422 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 GOT2P00505 430 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 RNASE12Q5GAN4 147 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 ZYG11AQ6WRX3 759 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 ATG14Q6ZNE5 492 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 PRSS58Q8IYP2 241 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 SPATA9Q9BWV2 254 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 MARK1Q9P0L2 795 aa17.98■□□□□ 0.47
SFSWAP-203ENST00000535236 KERAO60938 352 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 INHAP05111 366 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 GNSP15586 552 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 ATXN1P54253 815 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 PUDPQ08623 228 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC13A2Q13183 592 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 FRRS1Q6ZNA5 592 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 A0A1W2PQ72 361 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 RPL17P18621 184 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 PRSS55Q6UWB4 352 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 MON1BQ7L1V2 547 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 MAF1Q9H063 256 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 CORO1CQ9ULV4 474 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 ENPP3O14638 875 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 LRCH4O75427 683 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 C8GP07360 202 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 IL10RBQ08334 325 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 LCP2Q13094 533 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 PGBD2Q6P3X8 592 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 C11orf65Q8NCR3 313 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 SPATA22Q8NHS9 363 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 AZIN2Q96A70 460 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 EFHD2Q96C19 240 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 MUC13Q9H3R2 512 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 MAFBQ9Y5Q3 323 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 RGS20O76081 388 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 BMP6P22004 513 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 C5orf22Q49AR2 442 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 RBM44Q6ZP01 1051 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 HDDC3Q8N4P3 179 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 RBM4BQ9BQ04 359 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 RBM4Q9BWF3 364 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 FAM124BQ9H5Z6 455 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 DNAJC28Q9NX36 388 aa17.97■□□□□ 0.47
SFSWAP-203ENST00000535236 TLX3O43711 291 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 ICAM3P32942 547 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms