RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 SLC35F3Q8IY50 421 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 LILRA3Q8N6C8 439 aaPredicted RBP12.91□□□□□ -0.34
TMEM258-202ENST00000535042 FAM181AQ8N9Y4 354 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 LKAAEAR1Q8TD35 194 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 PYROXD1Q8WU10 500 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 PATE1Q8WXA2 126 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 CERS2Q96G23 380 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 ZNF514Q96K75 400 aaPredicted RBP12.91□□□□□ -0.34
TMEM258-202ENST00000535042 CNDP2Q96KP4 475 aaKnown RBP12.91□□□□□ -0.34
TMEM258-202ENST00000535042 LINC00615Q96LM1 132 aaPredicted RBP12.91□□□□□ -0.34
TMEM258-202ENST00000535042 TTC1Q99614 292 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 DUSP23Q9BVJ7 150 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 DPEP2Q9H4A9 486 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 PRDM8Q9NQV8 689 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 FBXO5Q9UKT4 447 aa12.91□□□□□ -0.34
TMEM258-202ENST00000535042 TDRD6O60522 2096 aaKnown RBP12.91□□□□□ -0.34
TMEM258-202ENST00000535042 WDR87Q6ZQQ6 2873 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 TRBV23OR9-2A0A075B6M9 112 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 SPAARA0A1B0GVQ0 90 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 MGAT4DA6NG13 374 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 IQCF5A8MTL0 148 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 B4DGG1 531 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 PRMT5O14744 637 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 SNX2O60749 519 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 AP2A2O94973 939 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 SLU7O95391 586 aaKnown RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 GABRB3P28472 473 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 DMPKQ09013 629 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 DNAJC3Q13217 504 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 CTSL3PQ5NE16 218 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 TEDDM1Q5T9Z0 273 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 C17orf82Q86X59 251 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 PALM2Q8IXS6 379 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 NAGSQ8N159 534 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 KYQ8NBH2 561 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 OR2L2Q8NH16 312 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 GSDMBQ8TAX9 411 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 ZDHHC1Q8WTX9 485 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 SCG3Q8WXD2 468 aaKnown RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 BIRC8Q96P09 236 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 TCF12Q99081 682 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 FAM167BQ9BTA0 163 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 FAM129AQ9BZQ8 928 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 OSGEPL1Q9H4B0 414 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 FBXO6Q9NRD1 293 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 SMYD2Q9NRG4 433 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 MOCS1Q9NZB8 636 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-202ENST00000535042 FAM8A1Q9UBU6 413 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 FTSJ1Q9UET6 329 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 NFU1Q9UMS0 254 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
TMEM258-202ENST00000535042 UBA6A0AVT1 1052 aaPredicted RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 PIAS1O75925 651 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 HAUS5O94927 633 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 KCNK5O95279 499 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 C1QAP02745 245 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 BRAFP15056 766 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 ITGB6P18564 788 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 SDHBP21912 280 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 RPS3P23396 243 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■■□□ 15
TMEM258-202ENST00000535042 RPL10P27635 214 aaKnown RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 FMO4P31512 558 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 PPARGP37231 505 aaPredicted RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 NOVA1P51513 510 aaKnown RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 EIF3BP55884 814 aaKnown RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 MAZP56270 477 aaKnown RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CUL1Q13616 776 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 TRIP6Q15654 476 aaKnown RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 NAPRTQ6XQN6 538 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CNTN4Q8IWV2 1026 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 LMNTD2Q8IXW0 634 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CFAP206Q8IYR0 622 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 KRT222Q8N1A0 295 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 ARL10Q8N8L6 244 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 C2CD4AQ8NCU7 369 aaPredicted RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 FMO2Q99518 471 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CDC6Q99741 560 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CCM2Q9BSQ5 444 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 SLC32A1Q9H598 525 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 LRRC4CQ9HCJ2 640 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 TOR4AQ9NXH8 423 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 MTRF1LQ9UGC7 380 aaKnown RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 ARID1BQ8NFD5 2236 aaPredicted RBP12.89□□□□□ -0.35
TMEM258-202ENST00000535042 CEP250Q9BV73 2442 aa12.89□□□□□ -0.35
TMEM258-202ENST00000535042 LAMA1P25391 3075 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 C17orf113A0A1B0GUU1 675 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 TNFSF14O43557 240 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 KCNJ13O60928 360 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 OR56A5P0C7T3 313 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms