RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 TXNRD3NBQ6F5E7 133 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 MED25Q71SY5 747 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 NT5DC3Q86UY8 548 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 IQCKQ8N0W5 287 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 CARFQ8N187 725 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 BEND7Q8N7W2 519 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-216ENST00000533078 TMEM102Q8N9M5 508 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-216ENST00000533078 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-216ENST00000533078 CLIP3Q96DZ5 547 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 SGSM3Q96HU1 749 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 BTBD6Q96KE9 485 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 VPS35Q96QK1 796 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 MAP3K3Q99759 626 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 MLXIPLQ9NP71 852 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 HRASLS2Q9NWW9 162 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.31□□□□□ -0.6
CMTM1-216ENST00000533078 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 SEMA5BQ9P283 1151 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 LCMT1Q9UIC8 334 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 PADI2Q9Y2J8 665 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 LRBAP50851 2863 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 SHANK1Q9Y566 2161 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 OR5K3A6NET4 321 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 A6NL46 340 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 C9J4A7 227 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 KCNK1O00180 336 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ZNF185O15231 689 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ALPPP05187 535 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 RAB40ALP0C0E4 278 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 PIRTP0C851 137 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 BPIP17213 487 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 VAV2P52735 878 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 CDK18Q07002 472 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 AP1B1Q10567 949 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 KRT33BQ14525 404 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 PCSK7Q16549 785 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 KYNUQ16719 465 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ODF2Q5BJF6 829 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 LYPLAL1Q5VWZ2 237 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 SLC6A19Q695T7 634 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 TMC3Q7Z5M5 1100 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 RAB43Q86YS6 212 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ZNF547Q8IVP9 402 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 D2HGDHQ8N465 521 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ENDOVQ8N8Q3 282 aaKnown RBP11.3□□□□□ -0.6
CMTM1-216ENST00000533078 FDCSPQ8NFU4 85 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 TM9SF4Q92544 642 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 RUFY1Q96T51 708 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 MAK16Q9BXY0 300 aaKnown RBP11.3□□□□□ -0.6
CMTM1-216ENST00000533078 NLNQ9BYT8 704 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 THAP2Q9H0W7 228 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 CHST8Q9H2A9 424 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 SYTL2Q9HCH5 934 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
CMTM1-216ENST00000533078 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 IMP3Q9NV31 184 aaKnown RBP11.3□□□□□ -0.6
CMTM1-216ENST00000533078 LUZP4Q9P127 313 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 SLC5A6Q9Y289 635 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
CMTM1-216ENST00000533078 SMTNL1A8MU46 457 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 MEN1O00255 615 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 PPP1R12AO14974 1030 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-216ENST00000533078 CEACAM4O75871 244 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 IGHEP01854 428 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 MMP2P08253 660 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 SKILP12757 684 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 CYP2A7P20853 494 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 DCTP40126 519 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 PPP1CAP62136 330 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 IFI35P80217 286 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-216ENST00000533078 GBE1Q04446 702 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 PPIDQ08752 370 aaKnown RBP11.29□□□□□ -0.6
CMTM1-216ENST00000533078 IHHQ14623 411 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 NAA30Q147X3 362 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-216ENST00000533078 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 RPE65Q16518 533 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 ZRANB3Q5FWF4 1079 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 LDLRAP1Q5SW96 308 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 RBM43Q6ZSC3 357 aaKnown RBP11.29□□□□□ -0.6
CMTM1-216ENST00000533078 APTXQ7Z2E3 356 aaKnown RBP11.29□□□□□ -0.6
CMTM1-216ENST00000533078 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 IP6K3Q96PC2 410 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 C17orf62Q9BQA9 187 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 SLC25A51Q9H1U9 297 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 TRABDQ9H4I3 376 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 DTLQ9NZJ0 730 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 C5AR2Q9P296 337 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 TCFL5Q9UL49 500 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 PSMD13Q9UNM6 376 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 HEY1Q9Y5J3 304 aa11.29□□□□□ -0.6
CMTM1-216ENST00000533078 DNMT3AQ9Y6K1 912 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms