RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 XIAPP98170 497 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 DMPKQ09013 629 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 CLCA4Q14CN2 919 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 FNBP1LQ5T0N5 605 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 KCTD11Q693B1 232 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 DET1Q7L5Y6 550 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 ARHGAP22Q7Z5H3 698 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 ART4Q93070 314 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 ULK4Q96C45 1275 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 BBC3Q96PG8 261 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-204ENST00000532550 ALS2CR12Q96Q35 445 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 ASPSCR1Q9BZE9 553 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 SLC40A1Q9NP59 571 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 LZTFL1Q9NQ48 299 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 OCIAD1Q9NX40 245 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 KLHL3Q9UH77 587 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 ZNF148Q9UQR1 794 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 PCDHGA3Q9Y5H0 932 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 SLC30A1Q9Y6M5 507 aa16.92■□□□□ 0.3
PHRF1-204ENST00000532550 B4E171 279 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 K7ENP7 123 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 LDB2O43679 373 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 TYRP1P17643 537 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 ITGALP20701 1170 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 TSPAN7P41732 249 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 RHDQ02161 417 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 DCAF12Q5T6F0 453 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 MEI1Q5TIA1 1274 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 INO80CQ6PI98 192 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-204ENST00000532550 SNX20Q7Z614 316 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 LINC00523Q86TU6 105 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 SLC13A5Q86YT5 568 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-204ENST00000532550 LRRC8AQ8IWT6 810 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 TAB3Q8N5C8 712 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-204ENST00000532550 HEXDCQ8WVB3 486 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 ATG4AQ8WYN0 398 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 PSMD13Q9UNM6 376 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 WDR37Q9Y2I8 494 aa16.91■□□□□ 0.3
PHRF1-204ENST00000532550 KLHL33A6NCF5 533 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 MGAT4DA6NG13 374 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 AGAP14A8MT82 685 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 STMND1H3BQB6 276 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 ATXN7O15265 892 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-204ENST00000532550 LIASO43766 372 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 NRDCO43847 1150 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 AP2A1O95782 977 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 IFNB1P01574 187 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 PBLDP30039 288 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-204ENST00000532550 ZNF140P52738 457 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-204ENST00000532550 RAB15P59190 212 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 NFE2L1Q14494 772 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 GPR33Q49SQ1 333 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 MANEAQ5SRI9 462 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 METRNLQ641Q3 311 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 BEND7Q8N7W2 519 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-204ENST00000532550 LSM14AQ8ND56 463 aaKnown RBP16.9■□□□□ 0.3
PHRF1-204ENST00000532550 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
PHRF1-204ENST00000532550 C1orf54Q8WWF1 131 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 COPS8Q99627 209 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 DDA1Q9BW61 102 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 FAM96AQ9H5X1 160 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 ACSL5Q9ULC5 683 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 B3GALT1Q9Y5Z6 326 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 MGAQ8IWI9 3026 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 ATRXP46100 2492 aa16.9■□□□□ 0.3
PHRF1-204ENST00000532550 ERI2A8K979 691 aaKnown RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 CFAP99D6REC4 459 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 ERVH48-1M5A8F1 160 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 TK2O00142 265 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 GAS8O95995 478 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 MC4RP32245 332 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 LMAN1P49257 510 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 MC2RQ01718 297 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 SNX1Q13596 522 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 SEPT6Q14141 434 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 GPR18Q14330 331 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 POU6F1Q14863 301 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 OASLQ15646 514 aaKnown RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 RPE65Q16518 533 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 TAF1BQ53T94 588 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 ZRANB3Q5FWF4 1079 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 FAM83HQ6ZRV2 1179 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 ZNF662Q6ZS27 426 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 DTX1Q86Y01 620 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 NXPE1Q8N323 547 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 OR2L2Q8NH16 312 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 STYXQ8WUJ0 223 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 SLC39A7Q92504 469 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 RTP4Q96DX8 246 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 DNAJC1Q96KC8 554 aaKnown RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 TEFMQ96QE5 360 aaKnown RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 NLE1Q9NVX2 485 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 PIH1D1Q9NWS0 290 aaKnown RBP16.89■□□□□ 0.29
PHRF1-204ENST00000532550 OGFRQ9NZT2 677 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 LOC400499M0QZD8 3231 aa16.89■□□□□ 0.29
PHRF1-204ENST00000532550 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-204ENST00000532550 E7EVH7 732 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 CCL22O00626 93 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 CAPN5O15484 640 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-204ENST00000532550 EFSO43281 561 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms