RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 LRRN3Q9H3W5 708 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 BPIFA1Q9NP55 256 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CASS4Q9NQ75 786 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 EIF2B3Q9NR50 452 aaKnown RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 PISDQ9UG56 409 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 CD84Q9UIB8 345 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 ATXN7L1Q9ULK2 861 aaPredicted RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 RPL26L1Q9UNX3 145 aaKnown RBP9.3□□□□□ -0.92
VPS26B-207ENST00000532160 ARL5AQ9Y689 179 aa9.3□□□□□ -0.92
VPS26B-207ENST00000532160 SDK2Q58EX2 2172 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 TMEM202A6NGA9 273 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ERI2A8K979 691 aaKnown RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CCL22O00626 93 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 TP73O15350 636 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 SLC28A2O43868 658 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 RECQL5O94762 991 aaPredicted RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ITIH1P19827 911 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 MGAT1P26572 445 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 HTR1BP28222 390 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CCKBRP32239 447 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ETV5P41161 510 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ETV3P41162 512 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 MAGEA6P43360 314 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 SUOXP51687 545 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 TMPRSS15P98073 1019 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 PTSQ03393 145 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CDH17Q12864 832 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 EIF3IQ13347 325 aaKnown RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 AGERQ15109 404 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 LINC00303Q3SY05 128 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 HP1BP3Q5SSJ5 553 aaPredicted RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 HIBCHQ6NVY1 386 aaPredicted RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 LRRC8BQ6P9F7 803 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CES3Q6UWW8 571 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 Q6ZVL8 140 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 TMPRSS9Q7Z410 1059 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 GLT6D1Q7Z4J2 308 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 LINC00523Q86TU6 105 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CAND1Q86VP6 1230 aaKnown RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CCNJLQ8IV13 435 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 PELI3Q8N2H9 469 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 MPP5Q8N3R9 675 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 TTC30BQ8N4P2 665 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 BBOF1Q8ND07 529 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 SERPINB12Q96P63 405 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ZIM3Q96PE6 472 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 TRIM56Q9BRZ2 755 aaKnown RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 STRADBQ9C0K7 418 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ZFYVE1Q9HBF4 777 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ARNT2Q9HBZ2 717 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 MAGEE1Q9HCI5 957 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 FGF22Q9HCT0 170 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 MRPL40Q9NQ50 206 aaKnown RBP9.29□□□□□ -0.92
VPS26B-207ENST00000532160 SYBUQ9NX95 663 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 GRHL1Q9NZI5 618 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 ANAPC5Q9UJX4 755 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 LOXL2Q9Y4K0 774 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 PCDHGA7Q9Y5G6 932 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 DGKBQ9Y6T7 804 aa9.29□□□□□ -0.92
VPS26B-207ENST00000532160 SPENQ96T58 3664 aaKnown RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 A0A087WUV0 522 aaPredicted RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 B4DGG1 531 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TNFP01375 233 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 JMJD7P0C870 316 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 NR1D1P20393 614 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 NFKBIAP25963 317 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 ATP5DP30049 168 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 STC1P52823 247 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 PLTPP55058 493 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 KIAA1024LP59773 190 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 DSG2Q14126 1118 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 FNBP1LQ5T0N5 605 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 ZDHHC24Q6UX98 284 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 PRICKLE2Q7Z3G6 844 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TMC3Q7Z5M5 1100 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TAF8Q7Z7C8 310 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 PCGF5Q86SE9 256 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 VASH2Q86V25 355 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 AGGF1Q8N302 714 aaeCLIP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 FAM46DQ8NEK8 389 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 OR4K2Q8NGD2 314 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 OR13C4Q8NGS5 318 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 EXTL1Q92935 676 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 SCAMP4Q969E2 229 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 COQ10AQ96MF6 247 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 ZNF778Q96MU6 729 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TMEM74Q96NL1 305 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 LYSMD1Q96S90 227 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TMEM109Q9BVC6 243 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 LGR4Q9BXB1 951 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 ROPN1BQ9BZX4 212 aaPredicted RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TMEM168Q9H0V1 697 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 EPN3Q9H201 632 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms