RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 ILF3Q12906 894 aaKnown RBP eCLIP7.31□□□□□ -1.24
BDNF-214ENST00000530786 TSNQ15631 228 aaKnown RBP7.31□□□□□ -1.24
BDNF-214ENST00000530786 SMAD2Q15796 467 aaKnown RBP7.31□□□□□ -1.24
BDNF-214ENST00000530786 TYSND1Q2T9J0 566 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 PIM3Q86V86 326 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 RIN3Q8TB24 985 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 ECHDC3Q96DC8 303 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 MED8Q96G25 268 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 SGK2Q9HBY8 427 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 PREBQ9HCU5 417 aa7.31□□□□□ -1.24
BDNF-214ENST00000530786 POP7O75817 140 aaKnown RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 KRT6AP02538 564 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PROCP04070 461 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 KRT6BP04259 564 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 POU3F3P20264 500 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 FCARP24071 287 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 KRT6CP48668 564 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 BLKP51451 505 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 WDR4P57081 412 aaKnown RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 PTSQ03393 145 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PTK2BQ14289 1009 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PLCL1Q15111 1095 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PDCD2Q16342 344 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 SH2D4BQ5SQS7 431 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PLEKHS1Q5SXH7 462 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 NEK5Q6P3R8 708 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ZNF765Q7L2R6 523 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CHST15Q7LFX5 561 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 MILR1Q7Z6M3 343 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 HEATR4Q86WZ0 1026 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PIANPQ8IYJ0 282 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PPP1R36Q96LQ0 422 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 TRPV5Q9NQA5 729 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ZNF358Q9NW07 568 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CYP8B1Q9UNU6 501 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 RAP2CQ9Y3L5 183 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 KLHL33A6NCF5 533 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 IQCF5A8MTL0 148 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 LIN7AO14910 233 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 KMOO15229 486 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 EDF1O60869 148 aaKnown RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 SKAP2O75563 359 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 SEMA4FO95754 770 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 GSTM1P09488 218 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 FDXRP22570 491 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 LTBRP36941 435 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 HK2P52789 917 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 DCDC1P59894 354 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 GSTM4Q03013 218 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 BTN2A1Q7KYR7 527 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 KIAA0907Q7Z7F0 614 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 KLHDC8BQ8IXV7 354 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 UBALD2Q8IYN6 164 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 AGGF1Q8N302 714 aaeCLIP7.3□□□□□ -1.24
BDNF-214ENST00000530786 TADA1Q96BN2 335 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CXorf40BQ96DE9 158 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 RSPH9Q9H1X1 276 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 NMRK1Q9NWW6 199 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 FAM53CQ9NYF3 392 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 UBAP1Q9NZ09 502 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 MMP17Q9ULZ9 603 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 KERAO60938 352 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 C1SP09871 688 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 SLC35E2BP0CK96 405 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 GCAP28676 217 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 EEF1DP29692 281 aaKnown RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 C21orf59P57076 290 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CBLBQ13191 982 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 MAPRE2Q15555 327 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 SPDYAQ5MJ70 313 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ICE2Q659A1 982 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 C16orf87Q6PH81 154 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ENPP7Q6UWV6 458 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CEP68Q76N32 757 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CYP2U1Q7Z449 544 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 OOSP2Q86WS3 158 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 OR2T34Q8NGX1 318 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 METTL6Q8TCB7 284 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 EEF1AKMT1Q8WVE0 214 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 KIAA1191Q96A73 305 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ZNF419Q96HQ0 510 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 MAGEB10Q96LZ2 347 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 ELOVL6Q9H5J4 265 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 SEMA4BQ9NPR2 832 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 FADS3Q9Y5Q0 445 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CAPN7Q9Y6W3 813 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 COL4A6Q14031 1691 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ANHXE9PGG2 379 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 NRG2O14511 850 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 GRID2O43424 1007 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 GMNNO75496 209 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CIB2O75838 187 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 OTCP00480 354 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 PRSS56P0CW18 603 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 GRK3P35626 688 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
BDNF-214ENST00000530786 TMEM52BQ4KMG9 183 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 ZNF789Q5FWF6 425 aa7.3□□□□□ -1.24
BDNF-214ENST00000530786 SULT1C3Q6IMI6 304 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms