RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 AKT2P31751 481 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 SDC2P34741 201 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 HSPA7P48741 367 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 DGKGP49619 791 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 MAPK12P53778 367 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 PRMT2P55345 433 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 NAE1Q13564 534 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 SLC1A5Q15758 541 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 DCST1Q5T197 706 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 CLEC6AQ6EIG7 209 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RANBP3LQ86VV4 465 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RALGPS2Q86X27 583 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 SLC34A3Q8N130 599 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 COX4I2Q96KJ9 171 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 TSSK3Q96PN8 268 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RAB11FIP5Q9BXF6 653 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 NOCTQ9UK39 431 aaKnown RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 NFAT5O94916 1531 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 FAM92AA1XBS5 289 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 FADS2P1A8MWK0 482 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 CASKO14936 926 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 OR1F1O43749 312 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 B3GALT2O43825 422 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 GMFGO60234 142 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 TM7SF2O76062 418 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 CCNB2O95067 398 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 PTGER3P43115 390 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 VPS26BQ4G0F5 336 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 LACTB2Q53H82 288 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 LPCAT4Q643R3 524 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 TAF8Q7Z7C8 310 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 AHI1Q8N157 1196 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 NIPA2Q8N8Q9 360 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 PIGXQ8TBF5 258 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 SLC22A17Q8WUG5 538 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 TSEN15Q8WW01 171 aaKnown RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 CLPTM1LQ96KA5 538 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RASSF1Q9NS23 344 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RAPGEFL1Q9UHV5 662 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 FAM208AQ9UK61 1670 aaKnown RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 TCRBV7S2A1N4TA0A589 114 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 SLC22A2O15244 555 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 IL12BP29460 328 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF280AP59817 542 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RPP38P78345 283 aaKnown RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 IL23RQ5VWK5 629 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 RTL4Q6ZR62 310 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 THAP5Q7Z6K1 395 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 BRSK1Q8TDC3 778 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 WFIKKN2Q8TEU8 576 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 NUS1Q96E22 293 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 CLCC1Q96S66 551 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 MRPS7Q9Y2R9 242 aaKnown RBP8.39□□□□□ -1.07
CTNND1-227ENST00000530748 TIMM22Q9Y584 194 aa8.39□□□□□ -1.07
CTNND1-227ENST00000530748 OR2AG2A6NM03 316 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 RIIAD1A6NNX1 92 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 RHPN2P1A8MT19 583 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CLDN4O14493 209 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 GABRDO14764 452 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CDK14O94921 469 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ASLP04424 464 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 LIPEQ05469 1076 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 GRSF1Q12849 480 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SMCO1Q147U7 214 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 UBXN11Q5T124 520 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 DRICH1Q6PGQ1 229 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SPATA22Q8NHS9 363 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 HM13Q8TCT9 377 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ING5Q8WYH8 240 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SPOCK2Q92563 424 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 APOBEC3GQ9HC16 384 aaKnown RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SLC45A1Q9Y2W3 748 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CPQQ9Y646 472 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 AK5Q9Y6K8 562 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 STX16-NPEPL1H3BU86 382 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 STX16O14662 325 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 RGS10O43665 173 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 VNN1O95497 513 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SLC35G6P0C7Q6 338 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PRPS2P11908 318 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 DDX6P26196 483 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■□□□ 13.6
CTNND1-227ENST00000530748 ALDH4A1P30038 563 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 WASP42768 502 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 LILRA4P59901 499 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 RBBP4Q09028 425 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SNAPC1Q16533 368 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 EIPR1Q53HC9 387 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CARD16Q5EG05 197 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ZCCHC12Q6PEW1 402 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 LDB1Q86U70 411 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SLCO6A1Q86UG4 719 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TMEM192Q8IY95 271 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ARL14EPQ8N8R7 260 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 OR7D4Q8NG98 312 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CAPSLQ8WWF8 208 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SLC9A6Q92581 669 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TBATAQ96M53 351 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 HAPLN3Q96S86 360 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms