RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 STX16-NPEPL1H3BU86 382 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 NDUFB5O43674 189 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 KDM1AO60341 852 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 NIPSNAP2O75323 286 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 GPC4O75487 556 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 ALPIP09923 528 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 NRF1Q16656 503 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 RP9Q8TA86 221 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 ADAMTS19Q8TE59 1207 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 LPGAT1Q92604 370 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 TAMM41Q96BW9 452 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CNDP2Q96KP4 475 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 SLC30A3Q99726 388 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CTRCQ99895 268 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 C1orf50Q9BV19 199 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 SMG9Q9H0W8 520 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 COQ10BQ9H8M1 238 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 TAS2R13Q9NYV9 303 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 LHX3Q9UBR4 397 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 IKZF3Q9UKT9 509 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 PTGDR2Q9Y5Y4 395 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 KRBA1A5PL33 1030 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 A8MX80 341 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 BNIP3LO60238 219 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 RNASEH2AO75792 299 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 ART3Q13508 389 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 TSNQ15631 228 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 TMEM214Q6NUQ4 689 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 XKR5Q6UX68 686 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 OTOP2Q7RTS6 562 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CAMK1DQ8IU85 385 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 PDPRQ8NCN5 879 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 PEX13Q92968 403 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 GIMAP2Q9UG22 337 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 NPEPPSL1A6NEC2 478 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 IQCF5A8MTL0 148 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CDC7O00311 574 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 SMAD6O43541 496 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 NME5P56597 212 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 SEMG2Q02383 582 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CYP2A13Q16696 494 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 TYSND1Q2T9J0 566 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 ANKRD26P1Q6NSI1 321 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 NCEH1Q6PIU2 408 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CYP2U1Q7Z449 544 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 RAB44Q7Z6P3 723 aaPredicted RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 CPSF7Q8N684 471 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 SIDT2Q8NBJ9 832 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 HJURPQ8NCD3 748 aaPredicted RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 ZNF689Q96CS4 500 aaPredicted RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 ZNF641Q96N77 438 aaPredicted RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 GPR63Q9BZJ6 419 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 ZNF385DQ9H6B1 395 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 FBRSL1Q9HCM7 1045 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 MID1IP1Q9NPA3 183 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CFAP97Q9P2B7 532 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 EVLQ9UI08 416 aaPredicted RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 RNF112Q9ULX5 631 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 CLEC4EQ9ULY5 219 aa11.43□□□□□ -0.58
USP35-207ENST00000530546 ACOT8O14734 319 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 FOXD2O60548 495 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 NOL3O60936 208 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 CLTBP09497 229 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 ALOX5P09917 674 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 LAG3P18627 525 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 CHRM3P20309 590 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 ADSLP30566 484 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 HERVK_113P63132 956 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 MS4A2Q01362 244 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 CEACAM7Q14002 265 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 OXA1LQ15070 435 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 ESAMQ96AP7 390 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 KLHL32Q96NJ5 620 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 TOX2Q96NM4 488 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 KCNA7Q96RP8 456 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 NPLQ9BXD5 320 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 ERVK-6Q9BXR3 956 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 IL21Q9HBE4 155 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 RIC8BQ9NVN3 520 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 INTS10Q9NVR2 710 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 CCDC167Q9P0B6 97 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 MED16Q9Y2X0 877 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 A0A1W2PPW3 197 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 BTN3A1O00481 513 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 UBDO15205 165 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 SLC26A3P40879 764 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 HNRNPFP52597 415 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 CDH15P55291 814 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 SH3BP2P78314 561 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 RAD51Q06609 339 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 AGKQ53H12 422 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 SETMARQ53H47 684 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 AARS2Q5JTZ9 985 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms