RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MACROD2A1Z1Q3 448 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 CCDC66A2RUB6 948 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 EME2A4GXA9 379 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 EFCAB7A8K855 629 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 DDX3YO15523 660 aaKnown RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 NADKO95544 446 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 TNFP01375 233 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 CEACAM5P06731 702 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 ARAFP10398 606 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 MYCLP1P12525 358 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 HGFP14210 728 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 CA4P22748 312 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 KELP23276 732 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 PTPN7P35236 360 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 PTGER4P35408 488 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 RWDD2BP57060 319 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 CDK3Q00526 305 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 CDK18Q07002 472 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 KIF5AQ12840 1032 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 XRCC4Q13426 336 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 GALNT3Q14435 633 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 NOMO1Q15155 1222 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 LVRNQ6Q4G3 990 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 ZNF765Q7L2R6 523 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 TMPRSS9Q7Z410 1059 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 B3GNT8Q7Z7M8 397 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 SLC35F3Q8IY50 421 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 NRSN1Q8IZ57 195 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 ZNF567Q8N184 647 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 SDR16C5Q8N3Y7 309 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 ATL2Q8NHH9 583 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 AP2M1Q96CW1 435 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 MLPHQ9BV36 600 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 FRMD8Q9BZ67 464 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 OSBPL8Q9BZF1 889 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 TMEM168Q9H0V1 697 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 WDR26Q9H7D7 661 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 C10orf88Q9H8K7 445 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 NOP53Q9NZM5 478 aaKnown RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 DNPEPQ9ULA0 475 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 ST14Q9Y5Y6 855 aa8.38□□□□□ -1.07
SSBP3-212ENST00000528930 NSD1Q96L73 2696 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-212ENST00000528930 C1orf232A0A0U1RR37 186 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 LOC285095A0A1B0GVY8 99 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PRSS38A1L453 326 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 TMEM200CA6NKL6 621 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ZNF891A8MT65 544 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 HACD1B0YJ81 288 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PDE2AO00408 941 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 NTN3O00634 580 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 SORBS2O94875 1100 aaKnown RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ANXA6P08133 673 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 CTSEP14091 401 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 LIFP15018 202 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 NFKB1P19838 968 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 RBL1P28749 1068 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 GPR1P46091 355 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 LEPRP48357 1165 aaKnown RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 POLD2P49005 469 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 SPINT3P49223 89 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 OTUD4Q01804 1114 aaKnown RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ELOCQ15369 112 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 TCEA2Q15560 299 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 RAET1GQ6H3X3 334 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 OGFOD3Q6PK18 319 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 KDELC1Q6UW63 502 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PID1Q7Z2X4 250 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PEX26Q7Z412 305 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 KDELC2Q7Z4H8 507 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 TMC3Q7Z5M5 1100 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 NRROSQ86YC3 692 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 SYCE1Q8N0S2 351 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 CCL4L1Q8NHW4 92 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ACTL9Q8TC94 416 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 APOBEC4Q8WW27 367 aaKnown RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 OXNAD1Q96HP4 312 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 COX14Q96I36 57 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 FCRL5Q96RD9 977 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 VAT1Q99536 393 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 GORASP1Q9BQQ3 440 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 RIOK2Q9BVS4 552 aaKnown RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ADGRE3Q9BY15 652 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 B3GNT4Q9C0J1 378 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 TSPYL1Q9H0U9 437 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 ETNK1Q9HBU6 452 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 MAGEE1Q9HCI5 957 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 CYP4F12Q9HCS2 524 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 LATS2Q9NRM7 1088 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PHPT1Q9NRX4 125 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 UBP1Q9NZI7 540 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 NCKIPSDQ9NZQ3 722 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PISDQ9UG56 409 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 CNOT6Q9ULM6 557 aaKnown RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 PACSIN2Q9UNF0 486 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-212ENST00000528930 SLC17A4Q9Y2C5 497 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms