RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 IGHV1OR21-1A0A087WYE8 117 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 A6NCN8 305 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 CASC3O15234 703 aaKnown RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 B4GAT1O43505 415 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 BRINP1O60477 761 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 JMJD7P0C870 316 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 MGAT1P26572 445 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 CA5AP35218 305 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 LSSP48449 732 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 CDKN1CP49918 316 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 ARSDP51689 593 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 CRADDP78560 199 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 EIF3IQ13347 325 aaKnown RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 KRT33BQ14525 404 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 NR1D2Q14995 579 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 RTP5Q14D33 572 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 BCL7AQ4VC05 210 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 PAPD7Q5XG87 772 aaKnown RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 WASH2PQ6VEQ5 465 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 RAB11FIP2Q7L804 512 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 C11orf96Q7Z7L8 435 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 B3GNT8Q7Z7M8 397 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 OR4L1Q8NH43 312 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 PEX13Q92968 403 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 EPB41L1Q9H4G0 881 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 XAB2Q9HCS7 855 aaKnown RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 WASH6PQ9NQA3 447 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 POT1Q9NUX5 634 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 SLC2A6Q9UGQ3 507 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 PSMD13Q9UNM6 376 aa13.14□□□□□ -0.31
CAPN1-215ENST00000528396 ZNF106Q9H2Y7 1883 aaKnown RBP13.14□□□□□ -0.31
CAPN1-215ENST00000528396 TRBV5-4A0A0C4DH59 114 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 OR51F1A6NGY5 319 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 OR52A4PA6NMU1 304 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 AGAP14A8MT82 685 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 AGRPO00253 132 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 QSOX1O00391 747 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 KRT37O76014 449 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 GOT2P00505 430 aaKnown RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 POLBP06746 335 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 PRSS56P0CW18 603 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 XRCC1P18887 633 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 PAMP19021 973 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CD1CP29017 333 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CASQ1P31415 396 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CCKBRP32239 447 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 NSG1P42857 185 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 PRLHRP49683 370 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 EPHA4P54764 986 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 DMPKQ09013 629 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 ITIH4Q14624 930 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 DBN1Q16643 649 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 KCTD19Q17RG1 926 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 ABRAXAS1Q6UWZ7 409 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CERS6Q6ZMG9 384 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 PROSER1Q86XN7 944 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 RBM12BQ8IXT5 1001 aaKnown RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 PIANPQ8IYJ0 282 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CFAP206Q8IYR0 622 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 FBXO39Q8N4B4 442 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 OR13J1Q8NGT2 312 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 OR2L2Q8NH16 312 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 HM13Q8TCT9 377 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 NCSTNQ92542 709 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 TMEM159Q96B96 161 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 RUNDC3BQ96NL0 473 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CMKLR1Q99788 373 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 TSSK1BQ9BXA7 367 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 DDX47Q9H0S4 455 aaKnown RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 THSD1Q9NS62 852 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 IMP3Q9NV31 184 aaKnown RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-215ENST00000528396 DKK4Q9UBT3 224 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
CAPN1-215ENST00000528396 IGLV3-16A0A075B6K0 115 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 LILRA5A6NI73 299 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 GOLGA8MH3BSY2 632 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 IFRD1O00458 451 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PLD2O14939 933 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PFDN6O15212 129 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 AP2A2O94973 939 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 FTH1P02794 183 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 GSTM1P09488 218 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 OR56A5P0C7T3 313 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 AMD1P17707 334 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 SLC19A1P41440 591 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PDX1P52945 283 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 UBE2IP63279 158 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms