RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 TRIM48Q8IWZ4 208 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 AGBL5Q8NDL9 886 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 KCNE4Q8WWG9 221 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 SGF29Q96ES7 293 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 PBKQ96KB5 322 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 DNAJC1Q96KC8 554 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 CCDC74BQ96LY2 380 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 RANBP9Q96S59 729 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 COPS8Q99627 209 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 SLC40A1Q9NP59 571 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 RAB6BQ9NRW1 208 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 ZDHHC3Q9NYG2 299 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 PISDQ9UG56 409 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
TRAPPC4-209ENST00000528230 IGLV3-16A0A075B6K0 115 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 HEATR9A2RTY3 570 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 AP3B1O00203 1094 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 SGTAO43765 313 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 HGFP14210 728 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 ATP1B2P14415 290 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 ADRA1DP25100 572 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 ACRV1P26436 265 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 CD82P27701 267 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 CSTF2P33240 577 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 RPL22P35268 128 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 PRLHRP49683 370 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 DRG2P55039 364 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 CACNG1Q06432 222 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 SEPT6Q14141 434 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 CLCA4Q14CN2 919 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 TMEM164Q5U3C3 297 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 BROXQ5VW32 411 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 PPP1R21Q6ZMI0 780 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 NLRP9Q7RTR0 991 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 PDZD3Q86UT5 571 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 PLXDC1Q8IUK5 500 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 RASGEF1CQ8N431 466 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 TAB3Q8N5C8 712 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 OR2L2Q8NH16 312 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 ZFPM2Q8WW38 1151 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 NCSTNQ92542 709 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 PEX13Q92968 403 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 CASS4Q9NQ75 786 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 EIF2B3Q9NR50 452 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 TTC7AQ9ULT0 858 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 WDR37Q9Y2I8 494 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 PCDHGA3Q9Y5H0 932 aa11.88□□□□□ -0.51
TRAPPC4-209ENST00000528230 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 B4E171 279 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 TOX3O15405 576 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 KLK10O43240 276 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 UBXN7O94888 489 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 AP2A2O94973 939 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 C9P02748 559 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 APRTP07741 180 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 GSTM1P09488 218 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 ITIH1P19827 911 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 MSNP26038 577 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 CXCR5P32302 372 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 ETV5P41161 510 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 TSPAN7P41732 249 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 PPM1FP49593 454 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 GSTM4Q03013 218 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 NFE2L1Q14494 772 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 RPE65Q16518 533 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 FAM83HQ6ZRV2 1179 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 DET1Q7L5Y6 550 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 GSTA5Q7RTV2 222 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 SERPINA9Q86WD7 417 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 JAMLQ86YT9 394 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 PRELID2Q8N945 189 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 GLIS1Q8NBF1 620 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 RCBTB1Q8NDN9 531 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 ANP32BQ92688 251 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 USP7Q93009 1102 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 SGSM3Q96HU1 749 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 TAAR9Q96RI9 348 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 CCM2Q9BSQ5 444 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 RAB33BQ9H082 229 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 FAM96AQ9H5X1 160 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 PRORYQ9H606 182 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 PIH1D1Q9NWS0 290 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 TMEM9Q9P0T7 183 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 EPHA6Q9UF33 1036 aa11.87□□□□□ -0.51
TRAPPC4-209ENST00000528230 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-209ENST00000528230 C9orf172C9J069 976 aa11.86□□□□□ -0.51
TRAPPC4-209ENST00000528230 QSOX1O00391 747 aa11.86□□□□□ -0.51
TRAPPC4-209ENST00000528230 CCL22O00626 93 aa11.86□□□□□ -0.51
TRAPPC4-209ENST00000528230 ANKRD34CP0C6C1 535 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms