RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 LBHD1Q9BQE6 289 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ADPGKQ9BRR6 497 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TCHPQ9BT92 498 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TRIM6Q9C030 488 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 MTMR12Q9C0I1 747 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ISCUQ9H1K1 167 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TTYH1Q9H313 450 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SFXN1Q9H9B4 322 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 FSCN3Q9NQT6 498 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TBC1D13Q9NVG8 400 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 RMND1Q9NWS8 449 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 MARCH5Q9NX47 278 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 RBAKQ9NYW8 714 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SIX4Q9UIU6 781 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 RWDD2AQ9UIY3 292 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 G3BP2Q9UN86 482 aaKnown RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 MAN2B2Q9Y2E5 1009 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NME7Q9Y5B8 376 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 INSL5Q9Y5Q6 135 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NUP210Q8TEM1 1887 aaPredicted RBP3.09□□□□□ -1.92
CSDE1-208ENST00000524652 NCOR2Q9Y618 2525 aa3.09□□□□□ -1.92
CSDE1-208ENST00000524652 MYOFQ9NZM1 2061 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ASPMQ8IZT6 3477 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ANO9A1A5B4 782 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CLEC18AA5D8T8 446 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 OR6C75A6NL08 312 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 I3L4J1 428 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 J3KTA2 159 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PSMA7O14818 248 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 MAPK13O15264 365 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 NKX2-8O15522 239 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CALUO43852 315 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 KAT7O95251 611 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GLP2RO95838 553 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 LDHAP00338 332 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ALDOAP04075 364 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 LCKP06239 509 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GALTP07902 379 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ACAA1P09110 424 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CLTAP09496 248 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 DLATP10515 647 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PTMSP20962 102 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ABCD1P33897 745 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PSMC2P35998 433 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 BRCC3P46736 316 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PRIM2P49643 509 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 KLK7P49862 253 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 VAMP7P51809 220 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GAS1P54826 345 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 DSCR9P59020 149 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SNRPFP62306 86 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 FKBP3Q00688 224 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 TLE3Q04726 772 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 LRRC63Q05C16 580 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 BFSP1Q12934 665 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GRIK3Q13003 919 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 MYBPC2Q14324 1141 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 NFATC4Q14934 902 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PSMD6Q15008 389 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SHBQ15464 509 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 UPP1Q16831 310 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 LRIT3Q3SXY7 679 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ARL13BQ3SXY8 428 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SPATA1Q5VX52 437 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SPOPLQ6IQ16 392 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 HMBOX1Q6NT76 420 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GJB7Q6PEY0 223 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 TMEM88Q6PEY1 159 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SASS6Q6UVJ0 657 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 STXBP4Q6ZWJ1 553 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GPSM1Q86YR5 675 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 FAM186BQ8IYM0 893 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SLC39A11Q8N1S5 342 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CSGALNACT2Q8N6G5 542 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PRR26Q8N8Z3 221 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 COLGALT1Q8NBJ5 622 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CLEC18CQ8NCF0 446 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 LMO3Q8TAP4 145 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PHOSPHO2Q8TCD6 241 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 GDPD5Q8WTR4 605 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SLC22A17Q8WUG5 538 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 KAT2AQ92830 837 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SLC35C1Q96A29 364 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CCDC47Q96A33 483 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CCDC127Q96BQ5 260 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 URB1-AS1Q96HZ7 61 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 RAD9AQ99638 391 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 BPIFA3Q9BQP9 254 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 PI4K2AQ9BTU6 479 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CCDC94Q9BW85 323 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 DCLK3Q9C098 648 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 TMEM117Q9H0C3 514 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SDCBP2Q9H190 292 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 ASB7Q9H672 318 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 RPF1Q9H9Y2 349 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 CERS4Q9HA82 394 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 IL21RQ9HBE5 538 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 APOBEC3GQ9HC16 384 aaKnown RBP3.08□□□□□ -1.92
CSDE1-208ENST00000524652 SIX2Q9NPC8 291 aa3.08□□□□□ -1.92
CSDE1-208ENST00000524652 NECTIN3Q9NQS3 549 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms