RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 DUS3LQ96G46 650 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 SMARCD1Q96GM5 515 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 CNDP2Q96KP4 475 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 RPRD1AQ96P16 312 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 CDK15Q96Q40 435 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 TDRD1Q9BXT4 1180 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 DSN1Q9H410 356 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 SDR39U1Q9NRG7 319 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 KLQ9UEF7 1012 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 EFCAB10A6NFE3 127 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 FAM25AB3EWG3 89 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 FAM25CB3EWG5 89 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 FAM25GB3EWG6 89 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 DYRK3O43781 588 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 TSC22D2O75157 780 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 PAGE1O75459 146 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 SLC25A27O95847 323 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 MT-ND2P03891 347 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 AZGP1P25311 298 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 KRT6CP48668 564 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 ALDH7A1P49419 539 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 IL2P60568 153 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 ZNF544Q6NX49 715 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 CLEC20AQ6ZU45 233 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 RIOX2Q8IUF8 465 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 APOBEC3FQ8IUX4 373 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 RAVER1Q8IY67 606 aaKnown RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 TTC29Q8NA56 475 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 CHDHQ8NE62 594 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 OR6J1Q8NGC5 347 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 ZNF486Q96H40 463 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 RDH12Q96NR8 316 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 OR52E6Q96RD3 313 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 SEMA3CQ99985 751 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 ZNF556Q9HAH1 456 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 PDP1Q9P0J1 537 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-212ENST00000523387 GALPQ9UBC7 116 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 IKZF3Q9UKT9 509 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 DERAQ9Y315 318 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 IFT52Q9Y366 437 aa8.93□□□□□ -0.98
CSMD1-212ENST00000523387 KRT87PA6NCN2 255 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 TRIM64CA6NLI5 447 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 STX7O15400 261 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ZW10O43264 779 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 SERPINA1P01009 418 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ITGB6P18564 788 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CD40LGP29965 261 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 S100A3P33764 101 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 IL12RB1P42701 662 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 LHX1P48742 406 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CDKN2DP55273 166 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ARPP19P56211 112 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 GALNT3Q14435 633 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 SPATS1Q496A3 300 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 UBE2UQ5VVX9 321 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CCBE1Q6UXH8 406 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 MIB1Q86YT6 1006 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CILP2Q8IUL8 1156 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 MMAAQ8IVH4 418 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ZDHHC21Q8IVQ6 265 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 THEM5Q8N1Q8 247 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 TMEM132CQ8N3T6 1108 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 NKAPQ8N5F7 415 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 OR4L1Q8NH43 312 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ADAMTS16Q8TE57 1224 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 GPR21Q99679 349 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 NECTIN3Q9NQS3 549 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 KCTD3Q9Y597 815 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 USP3Q9Y6I4 520 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 PMF1-BGLAPU3KQ54 211 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ENPP3O14638 875 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 NUAK1O60285 661 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 BEST1O76090 585 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 SCELO95171 688 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CPNE6O95741 557 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 STAU1O95793 577 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 GOT2P00505 430 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CAPN1P07384 714 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CNPP09543 421 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 POU1F1P28069 291 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 HCAR3P49019 387 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 FAM174BQ3ZCQ3 159 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 INO80DQ53TQ3 878 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 PAQR3Q6TCH7 311 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 ISCA2Q86U28 154 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 SPATA2LQ8IUW3 424 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 DTWD1Q8N5C7 304 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 PIK3C3Q8NEB9 887 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 LINGO1Q96FE5 620 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 GPR78Q96P69 363 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 SLC25A51Q9H1U9 297 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 AGO3Q9H9G7 860 aaKnown RBP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 CPNE5Q9HCH3 593 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
CSMD1-212ENST00000523387 SLAMF8Q9P0V8 285 aa8.92□□□□□ -0.98
CSMD1-212ENST00000523387 VPS9D1Q9Y2B5 631 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms