RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TCEAL5Q5H9L2 206 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 C10orf120Q5SQS8 335 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SPOUT1Q5T280 376 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 TIGD7Q6NT04 549 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 FRMD5Q7Z6J6 570 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 TTC7BQ86TV6 843 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 HORMAD1Q86X24 394 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 GID4Q8IVV7 300 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 GALNT12Q8IXK2 581 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 C4orf19Q8IY42 314 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MICU2Q8IYU8 434 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CYP4Z2PQ8N1L4 340 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CENPSQ8N2Z9 138 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SH2D3CQ8N5H7 860 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 TRAM1L1Q8N609 369 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 ASCC1Q8N9N2 400 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CCDC197Q8NCU1 140 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CATSPER1Q8NEC5 780 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 ADCY4Q8NFM4 1077 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RP9Q8TA86 221 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 KBTBD7Q8WVZ9 684 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 LIPHQ8WWY8 451 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PROX1Q92786 737 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CCDC51Q96ER9 411 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 FUBP3Q96I24 572 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 ZIM3Q96PE6 472 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 LRRC1Q9BTT6 524 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MMP27Q9H306 513 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MAGEE1Q9HCI5 957 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 NCKIPSDQ9NZQ3 722 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SLC24A2Q9UI40 661 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PLAGL2Q9UPG8 496 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 NOC2LQ9Y3T9 749 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 ASB4Q9Y574 426 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 IGKV6-21A0A0C4DH24 114 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 A0A0U1RQF3 1178 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 A0A0U1RQK1 487 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 A0A1W2PRG6 482 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 BCLAF3A2AJT9 711 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF729A6NN14 1252 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF487B1APH4 448 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF701M0R085 212 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 PPEF2O14830 753 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 GRM6O15303 877 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 NUAK1O60285 661 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 EIF1BO60739 113 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 VPS4BO75351 444 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 GPX5O75715 221 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 SULT1C4O75897 302 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 PGLSO95336 258 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TNNC2P02585 160 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 IGFBP1P08833 259 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 PLA2G4BP0C869 781 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 DHRS4L1P0CG22 281 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CKMT2P17540 419 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RHCEP18577 417 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 YWHABP31946 246 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TAGLN2P37802 199 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 EIF1P41567 113 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 FHITP49789 147 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 MEOX2P50222 304 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RASSF2P50749 326 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CDK9P50750 372 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CCR5P51681 352 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 PGDP52209 483 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CDR2Q01850 454 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 SMCO1Q147U7 214 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 KARSQ15046 597 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 NPY5RQ15761 445 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ETFDHQ16134 617 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 STX1AQ16623 288 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CYP2A13Q16696 494 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CA9Q16790 459 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TUSC1Q2TAM9 212 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 NKAIN1Q4KMZ8 207 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TMEM119Q4V9L6 283 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CRTC2Q53ET0 693 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 GPAT3Q53EU6 434 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZMAT1Q5H9K5 638 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 EARS2Q5JPH6 523 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 LIPNQ5VXI9 398 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 KIAA1161Q6NSJ0 714 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF813Q6ZN06 617 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RBM43Q6ZSC3 357 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CHST15Q7LFX5 561 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 BHLHA15Q7RTS1 189 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TMC3Q7Z5M5 1100 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 SPRED2Q7Z698 418 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RTN4RL1Q86UN2 441 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 GSPT2Q8IYD1 628 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 KIAA2013Q8IYS2 634 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 FNDC5Q8NAU1 212 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 OR5T2Q8NGG2 359 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 OR52M1Q8NGK5 317 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms