RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SPDYE1Q8NFV5 336 aaPredicted RBP17.53■□□□□ 0.4
CLK4-211ENST00000522556 WDR48Q8TAF3 677 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 CPT1BQ92523 772 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 COPS8Q99627 209 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 C19orf43Q9BQ61 176 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 ASCL3Q9NQ33 180 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 CHRAC1Q9NRG0 131 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 ZDHHC3Q9NYG2 299 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 MARCH4Q9P2E8 410 aaPredicted RBP17.53■□□□□ 0.4
CLK4-211ENST00000522556 DKK4Q9UBT3 224 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 CFAP20Q9Y6A4 193 aaKnown RBP17.53■□□□□ 0.4
CLK4-211ENST00000522556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.52■□□□□ 0.4
CLK4-211ENST00000522556 KIR2DS5A0A0G2JLQ3 304 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 A0A0G2JNG1 304 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 KIR2DS3K7RE56 304 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 CES2O00748 559 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 KRT37O76014 449 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 CPNE6O95741 557 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 TPSB2P20231 275 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 ADRA1DP25100 572 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 ETV5P41161 510 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 GPR3P46089 330 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 PRLHRP49683 370 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 CACNG1Q06432 222 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 KIR2DS5Q14953 304 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 TPSAB1Q15661 275 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 GPR33Q49SQ1 333 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 ZNF658BQ4V348 819 aaPredicted RBP17.52■□□□□ 0.4
CLK4-211ENST00000522556 PAPD7Q5XG87 772 aaKnown RBP17.52■□□□□ 0.4
CLK4-211ENST00000522556 LDB1Q86U70 411 aaPredicted RBP17.52■□□□□ 0.4
CLK4-211ENST00000522556 CREG2Q8IUH2 290 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 AGGF1Q8N302 714 aaeCLIP17.52■□□□□ 0.4
CLK4-211ENST00000522556 CCDC74BQ96LY2 380 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 SLC38A3Q99624 504 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 POLR1BQ9H9Y6 1135 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 OGFRQ9NZT2 677 aa17.52■□□□□ 0.4
CLK4-211ENST00000522556 ACACAQ13085 2346 aa17.52■□□□□ 0.39
CLK4-211ENST00000522556 IGHV5-10-1A0A0J9YXX1 117 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 MGAT4DA6NG13 374 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 GOLGA8MH3BSY2 632 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 OR1I1O60431 355 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 ATP1B2P14415 290 aaPredicted RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 TCP1P17987 556 aaKnown RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 ITIH1P19827 911 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 IDSP22304 550 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 ARNTP27540 789 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 CCKBRP32239 447 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 MAGEA6P43360 314 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 LSSP48449 732 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 PHF19Q5T6S3 580 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 AGAP9Q5VTM2 703 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 C4orf22Q6V702 233 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 SLC9B2Q86UD5 537 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 CAND1Q86VP6 1230 aaKnown RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 PPHLN1Q8NEY8 458 aaKnown RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 DCUN1D1Q96GG9 259 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 LIN37Q96GY3 246 aaPredicted RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 RMDN2Q96LZ7 410 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 NAP1L3Q99457 506 aaPredicted RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 NAPGQ99747 312 aaPredicted RBP17.51■□□□□ 0.39
CLK4-211ENST00000522556 WWP1Q9H0M0 922 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 TREX1Q9NSU2 369 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 ADAMTS20P59510 1910 aa17.51■□□□□ 0.39
CLK4-211ENST00000522556 CCDC187A0A096LP49 1063 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 GAS8O95995 478 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 POLBP06746 335 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 F7P08709 466 aaPredicted RBP17.5■□□□□ 0.39
CLK4-211ENST00000522556 XRCC1P18887 633 aaPredicted RBP17.5■□□□□ 0.39
CLK4-211ENST00000522556 FNTAP49354 379 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 GPR18Q14330 331 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 PCID2Q5JVF3 399 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 LRRC8BQ6P9F7 803 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 AFTPHQ6ULP2 937 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 WASH2PQ6VEQ5 465 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 NAPRTQ6XQN6 538 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 RAB11FIP2Q7L804 512 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 PIM3Q86V86 326 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 OR2L2Q8NH16 312 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 PMEPA1Q969W9 287 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 MFSD3Q96ES6 412 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 DCBLD2Q96PD2 775 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 NRTNQ99748 197 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 WASH6PQ9NQA3 447 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 RIMKLBQ9ULI2 386 aa17.5■□□□□ 0.39
CLK4-211ENST00000522556 OR5K4A6NMS3 321 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 VIPP01282 170 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 SLC2A4P14672 509 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 TYRP1P17643 537 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 VCLP18206 1134 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 PTGIRP43119 386 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 PREPP48147 710 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 PPM1FP49593 454 aaPredicted RBP17.49■□□□□ 0.39
CLK4-211ENST00000522556 GFERP55789 205 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 PPP1CAP62136 330 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 RPE65Q16518 533 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 TBC1D25Q3MII6 688 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 SNAP47Q5SQN1 464 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 METRNLQ641Q3 311 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 TMEM26Q6ZUK4 368 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms