RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 LRRC1Q9BTT6 524 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 SPATC1LQ9H0A9 340 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 KCNK15Q9H427 330 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 CHMP1AQ9HD42 196 aaPredicted RBP5.16□□□□□ -1.58
NPM1-206ENST00000519955 ABCF3Q9NUQ8 709 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 TAS2R14Q9NYV8 317 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 WWOXQ9NZC7 414 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 MARCH4Q9P2E8 410 aaPredicted RBP5.16□□□□□ -1.58
NPM1-206ENST00000519955 MORF4L1Q9UBU8 362 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 HACL1Q9UJ83 578 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 YIPF1Q9Y548 306 aa5.16□□□□□ -1.58
NPM1-206ENST00000519955 OR2M5A3KFT3 312 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 ERAL1O75616 437 aaKnown RBP5.15□□□□□ -1.59
NPM1-206ENST00000519955 TPOP07202 933 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 NMBRP28336 390 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 AHRP35869 848 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 ARCN1P48444 511 aaKnown RBP5.15□□□□□ -1.59
NPM1-206ENST00000519955 CD81P60033 236 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 SIRPAP78324 504 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 GRAPQ13588 217 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 BECN1Q14457 450 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 FAM98BQ52LJ0 330 aaKnown RBP5.15□□□□□ -1.59
NPM1-206ENST00000519955 FAM171BQ6P995 826 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 FOXL2NBQ6ZUU3 175 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 HAUS6Q7Z4H7 955 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 PRPF39Q86UA1 669 aaKnown RBP5.15□□□□□ -1.59
NPM1-206ENST00000519955 MINDY1Q8N5J2 469 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 OR52I2Q8NH67 350 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 SPATA20Q8TB22 786 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 PTPMT1Q8WUK0 201 aaPredicted RBP5.15□□□□□ -1.59
NPM1-206ENST00000519955 PKP4Q99569 1192 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 MMP27Q9H306 513 aa5.15□□□□□ -1.59
NPM1-206ENST00000519955 LARSQ9P2J5 1176 aaKnown RBP5.15□□□□□ -1.59
NPM1-206ENST00000519955 LOC102723996A0A087X1L8 192 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 CTAGE9A4FU28 777 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 PLK4O00444 970 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 BUB3O43684 328 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 KRT36O76013 467 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 CSPG5O95196 566 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 F7P08709 466 aaPredicted RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 CTAGE8P0CG41 777 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 AKR1B1P15121 316 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 HOXB6P17509 224 aaKnown RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 AMD1P17707 334 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 SNRPEP62304 92 aaKnown RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 IFI35P80217 286 aaPredicted RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 GAGE5Q13069 117 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 GAGE6Q13070 117 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 ZNF672Q499Z4 452 aaPredicted RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 IGSF11Q5DX21 431 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 TMCO3Q6UWJ1 677 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 RAD9BQ6WBX8 426 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 C18orf65Q6ZTR6 163 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 CTAGE4Q8IX94 777 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 DCP1BQ8IZD4 617 aaKnown RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 GBGT1Q8N5D6 347 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 METTL27Q8N6F8 245 aaPredicted RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 MAB21L3Q8N8X9 362 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 CCDC89Q8N998 374 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 SYT2Q8N9I0 419 aaPredicted RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 TBC1D16Q8TBP0 767 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 CD101Q93033 1021 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 ZNF622Q969S3 477 aaKnown RBP eCLIP5.14□□□□□ -1.593e-21■□□□□ 9.3
NPM1-206ENST00000519955 LINGO1Q96FE5 620 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 ABHD8Q96I13 439 aa5.14□□□□□ -1.59
NPM1-206ENST00000519955 PPIL3Q9H2H8 161 aaKnown RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 DENND2DQ9H6A0 471 aaPredicted RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 CPSF2Q9P2I0 782 aaKnown RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 PPIEQ9UNP9 301 aaKnown RBP5.14□□□□□ -1.59
NPM1-206ENST00000519955 GPR75-ASB3A0A0A6YYF3 556 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 SYNDIG1LA6NDD5 238 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 A6NL46 340 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 MAGEB17A8MXT2 336 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 H0YIN7 160 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 SH2B2O14492 632 aaPredicted RBP5.13□□□□□ -1.59
NPM1-206ENST00000519955 DVL1O14640 695 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 FIBPO43427 364 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 WISP2O76076 250 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 PDE9AO76083 593 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 BMP10O95393 424 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 FMO5P49326 533 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 HOXA1P49639 335 aaPredicted RBP5.13□□□□□ -1.59
NPM1-206ENST00000519955 CALD1Q05682 793 aaKnown RBP5.13□□□□□ -1.59
NPM1-206ENST00000519955 ACCSLQ4AC99 568 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 PDSS1Q5T2R2 415 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 MFSD4BQ5TF39 518 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 GARNL3Q5VVW2 1013 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 GPR139Q6DWJ6 353 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 C9orf139Q6ZV77 190 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 DSG4Q86SJ6 1040 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 LDB1Q86U70 411 aaPredicted RBP5.13□□□□□ -1.59
NPM1-206ENST00000519955 SLC9B2Q86UD5 537 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 GUF1Q8N442 669 aaKnown RBP5.13□□□□□ -1.59
NPM1-206ENST00000519955 SMPDL3BQ92485 455 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 POLR3CQ9BUI4 534 aaPredicted RBP5.13□□□□□ -1.59
NPM1-206ENST00000519955 SEMA6AQ9H2E6 1030 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 ANKEF1Q9NU02 776 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 NKIRAS2Q9NYR9 191 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 KCNG2Q9UJ96 466 aa5.13□□□□□ -1.59
NPM1-206ENST00000519955 WBP11Q9Y2W2 641 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms