RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CPSF6Q16630 551 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TBC1D25Q3MII6 688 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 LBHQ53QV2 105 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 RABL3Q5HYI8 236 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANXA8L1Q5VT79 327 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ARHGEF16Q5VV41 709 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM268Q5VZI3 342 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 KCTD11Q693B1 232 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TXNRD3NBQ6F5E7 133 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MIS18BP1Q6P0N0 1132 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 FBXO46Q6PJ61 603 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 RANBP10Q6VN20 620 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MICALCLQ6ZW33 695 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATG9AQ7Z3C6 839 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PLEKHH3Q7Z736 793 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TSPAN33Q86UF1 283 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SGMS1Q86VZ5 419 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM173Q86WV6 379 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMPRSS6Q8IU80 811 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SIAH3Q8IW03 269 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 AQP12AQ8IXF9 295 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 LAS2Q8IYD9 372 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ADGRG5Q8IZF4 528 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM109AQ8N4B1 249 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF321PQ8N8H1 164 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PNPLA1Q8N8W4 532 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 RASGEF1AQ8N9B8 481 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 C8orf58Q8NAV2 365 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR10T2Q8NGX3 314 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR2T3Q8NH03 318 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MIPOL1Q8TD10 442 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CKAP2Q8WWK9 683 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SNX19Q92543 992 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 AKAP1Q92667 903 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAD54LQ92698 747 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PEX13Q92968 403 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 IGSF8Q969P0 613 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM46BQ96A09 425 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 AZIN2Q96A70 460 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ESAMQ96AP7 390 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM125Q96AQ2 219 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZBTB8AQ96BR9 441 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PHF21BQ96EK2 531 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAGED4Q96JG8 741 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF512Q96ME7 567 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 COQ10AQ96MF6 247 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRICKLE1Q96MT3 831 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PSKH2Q96QS6 385 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SECISBP2Q96T21 854 aaKnown RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MPHOSPH9Q99550 1183 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAD9AQ99638 391 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 OLFM1Q99784 485 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 DDX50Q9BQ39 737 aaKnown RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM47Q9BQJ4 181 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZSWIM1Q9BR11 485 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 GON7Q9BXV9 100 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ACTRT3Q9BYD9 372 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 NAPBQ9H115 298 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 L2HGDHQ9H9P8 463 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 LMAN1LQ9HAT1 526 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 EQTNQ9NQ60 294 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CHRNA9Q9UGM1 479 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TEKT2Q9UIF3 430 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CCNL1Q9UK58 526 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 FBXO4Q9UKT5 387 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CLEC4AQ9UMR7 237 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 DTX4Q9Y2E6 619 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZDHHC9Q9Y397 364 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MFHAS1Q9Y4C4 1052 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ASTN2O75129 1339 aaPredicted RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRAMEF33A0A0G2JMD5 474 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 A0A1B0GTW7 788 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 CPED1A4D0V7 1026 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR14I1A6ND48 311 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 CBY3A6NI87 242 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 TTC34A8MYJ7 566 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 STMND1H3BQB6 276 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 CLDN4O14493 209 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAGEB2O15479 319 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 PPIP5K2O43314 1243 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 TLX2O43763 284 aaPredicted RBP3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPOPO43791 374 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRAMEF10O60809 474 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRAMEF11O60813 436 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 FCGR3BO75015 233 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATP9AO75110 1047 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 MOSPD3O75425 235 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 MTRF1O75570 445 aaKnown RBP3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAD51DO75771 328 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 CNTN5O94779 1100 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 GPANK1O95872 356 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 IL1BP01584 269 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 HLA-DQA2P01906 255 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 MBPP02686 304 aaPredicted RBP3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 FESP07332 822 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 FGF4P08620 206 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 PLA2G4BP0C869 781 aa3.89□□□□□ -1.79
RNU4-60P-201ENST00000517239 CALCBP10092 127 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms