RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 OVCA2Q8WZ82 227 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 HAS2Q92819 552 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TSACCQ96A04 125 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SAAL1Q96ER3 474 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TRMT61AQ96FX7 289 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ANKRD36BP1Q96IX9 119 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF560Q96MR9 790 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 IP6K3Q96PC2 410 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 LENG8Q96PV6 779 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 SH3GL2Q99962 352 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CITED1Q99966 193 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ACBD6Q9BR61 282 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 RHNO1Q9BSD3 238 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FUT8Q9BYC5 575 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FGFBP2Q9BYJ0 223 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 XPO4Q9C0E2 1151 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 NACA2Q9H009 215 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 NAT10Q9H0A0 1025 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TKTL2Q9H0I9 626 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PCIF1Q9H4Z3 704 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 THAP9Q9H5L6 903 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CYP3A43Q9HB55 503 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 TMEM8AQ9HCN3 771 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PDE11AQ9HCR9 933 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ABCB8Q9NUT2 735 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ANO10Q9NW15 660 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 FBXO34Q9NWN3 711 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 PLA2G3Q9NZ20 509 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 ARMCX3Q9UH62 379 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 CHORDC1Q9UHD1 332 aaPredicted RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 GGA2Q9UJY4 613 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 NOCTQ9UK39 431 aaKnown RBP3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 GRID1Q9ULK0 1009 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 COQ4Q9Y3A0 265 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 HS3ST4Q9Y661 456 aa3.09□□□□□ -1.91
SCARNA13-201ENST00000516672 WNK2Q9Y3S1 2297 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 A0A0G2JNJ9 132 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 C17orf113A0A1B0GUU1 675 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GOLGA8IPA6NC78 632 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GOLGA8JA6NMD2 632 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 LRRIQ3A6PVS8 624 aaPredicted RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 EFCAB8A8MWE9 144 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TISP43B9A030 160 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 J3QL48 77 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MYO1CO00159 1063 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GABRDO14764 452 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CLIC2O15247 247 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ASNA1O43681 348 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TLR5O60602 858 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 HUS1O60921 280 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 DNAJC6O75061 913 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 PCDH8O95206 1070 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ASS1P00966 412 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CST3P01034 146 aaPredicted RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TUBB4AP04350 444 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CYBBP04839 570 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RAB40ALP0C0E4 278 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TMEM191BP0C7N4 346 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 DLATP10515 647 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 HARSP12081 509 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CD44P16070 742 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TRIM21P19474 475 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MDKP21741 143 aaPredicted RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 BDNFP23560 247 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ACAT1P24752 427 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 EEF1GP26641 437 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ANXA13P27216 316 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 HOXD9P28356 352 aaPredicted RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CASQ1P31415 396 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GGCXP38435 758 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 SCNN1BP51168 640 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CYP2J2P51589 502 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ARSEP51690 589 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GYS2P54840 703 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 UBA52P62987 128 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TPM4P67936 248 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TFAMQ00059 246 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ALDH6A1Q02252 535 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GOLGA8FQ08AF8 430 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 GOLGA8DPQ0D2H9 430 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 AIMP2Q13155 320 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MFAP5Q13361 173 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 BIRC2Q13490 618 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TRPC3Q13507 836 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 NCOA4Q13772 614 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ALG11Q2TAA5 492 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.08□□□□□ -1.921e-323■■■■□ 19.4
SCARNA13-201ENST00000516672 OXLD1Q5BKU9 147 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 C1orf220Q5T0J3 134 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 IRAK1BP1Q5VVH5 260 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM46CQ5VWP2 391 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ATG9BQ674R7 924 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 LCN10Q6JVE6 187 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC30A9Q6PML9 568 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ISLR2Q6UXK2 745 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 C17orf107Q6ZR85 190 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ENOSF1Q7L5Y1 443 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TAF8Q7Z7C8 310 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 UNC93AQ86WB7 457 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 PPP1R3BQ86XI6 285 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms