RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 NDST3O95803 873 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 TCF4P15884 667 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 ITGB5P18084 799 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 CSKP41240 450 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 NRLP54845 237 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 NOMO3P69849 1222 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 PRR5P85299 388 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 FAM71AQ8IYT1 594 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 ZNF366Q8N895 744 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 LNX1Q8TBB1 728 aaPredicted RBP10.91□□□□□ -0.66
TRIM41-209ENST00000515834 STYXQ8WUJ0 223 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 NCSTNQ92542 709 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 PLD4Q96BZ4 506 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 CYP2S1Q96SQ9 504 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 ANKHQ9HCJ1 492 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 FANCFQ9NPI8 374 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 TRAF6Q9Y4K3 522 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 PCDHGB5Q9Y5G0 923 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 PCDHA2Q9Y5H9 948 aa10.91□□□□□ -0.66
TRIM41-209ENST00000515834 MFSD11O43934 449 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 CAPGP40121 348 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PPIDQ08752 370 aaKnown RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ZMYND11Q15326 602 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 HKDC1Q2TB90 917 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 BROXQ5VW32 411 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 CUZD1Q86UP6 607 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 SIDT2Q8NBJ9 832 aaKnown RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 DGAT2Q96PD7 388 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 TBL1XR1Q9BZK7 514 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 GNEQ9Y223 722 aaKnown RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 WASHC1A8K0Z3 465 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 WASH3PC4AMC7 463 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 LDOC1O95751 146 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ADH5P11766 374 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ADSSP30520 456 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 GTF2H2Q13888 395 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 VPS26BQ4G0F5 336 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 GTF2H2CQ6P1K8 395 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 WASH2PQ6VEQ5 465 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PHF13Q86YI8 300 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 GSC2O15499 205 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 STK16O75716 305 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 LRIG2O94898 1065 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 RHOQP17081 205 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PSMD7P51665 324 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 RFTN2Q52LD8 501 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 DHDDSQ86SQ9 333 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ZBTB46Q86UZ6 589 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 RANBP3LQ86VV4 465 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 AMZ2Q86W34 360 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PSMA8Q8TAA3 256 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 RDH11Q8TC12 318 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 AP3S1Q92572 193 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PRICKLE1Q96MT3 831 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PDZD7Q9H5P4 517 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 CFAP20Q9Y6A4 193 aaKnown RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 SEC24AO95486 1093 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ARCN1P48444 511 aaKnown RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ITGB3BPQ13352 177 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 EOGTQ5NDL2 527 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ARHGAP40Q5TG30 622 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 SLC29A4Q7RTT9 530 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 FAM13CQ8NE31 585 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 PIK3C3Q8NEB9 887 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 DLG3Q92796 817 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 TRIM2Q9C040 744 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 WDR26Q9H7D7 661 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 ABCB9Q9NP78 766 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 SPATA6Q9NWH7 488 aaPredicted RBP10.9□□□□□ -0.66
TRIM41-209ENST00000515834 KLRF1Q9NZS2 232 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 GGA2Q9UJY4 613 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 RIMKLBQ9ULI2 386 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 MGAT4AQ9UM21 535 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 SETBP1Q9Y6X0 1596 aa10.9□□□□□ -0.66
TRIM41-209ENST00000515834 A0A0J9YYE9 177 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 ARHGEF33A8MVX0 844 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 WFS1O76024 890 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 BCAP31P51572 246 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 CORO7P57737 925 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 ABATP80404 500 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 PCBP2Q15366 365 aaKnown RBP eCLIP10.9□□□□□ -0.671e-11■■■□□ 16
TRIM41-209ENST00000515834 ATG14Q6ZNE5 492 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 FBXW8Q8N3Y1 598 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 KIAA1143Q96AT1 154 aaPredicted RBP10.9□□□□□ -0.67
TRIM41-209ENST00000515834 TESCQ96BS2 214 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 PPM1MQ96MI6 270 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 IPPKQ9H8X2 491 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 BRD7Q9NPI1 651 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 PNPOQ9NVS9 261 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 TRIM38O00635 465 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 FADS2O95864 444 aaKnown RBP10.9□□□□□ -0.67
TRIM41-209ENST00000515834 IL7RP16871 459 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 MARCKSL1P49006 195 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 CHIT1Q13231 466 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 ANO7Q6IWH7 933 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 ABHD15Q6UXT9 468 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 GK5Q6ZS86 529 aa10.9□□□□□ -0.67
TRIM41-209ENST00000515834 DGLUCYQ7Z3D6 616 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms