RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620		A0A1B0GUH1	482 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	GPR89A	B7ZAQ6	455 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620		C9J4A7	227 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	MASP2	O00187	686 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	PRPSAP2	O60256	369 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	MTX2	O75431	263 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	IPO13	O94829	963 aa	Known RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	LCA5L	O95447	670 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	STS	P08842	583 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	GPR89B	P0CG08	455 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	EDN3	P14138	238 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	COX6B1	P14854	86 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	IDS	P22304	550 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	FECH	P22830	423 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	RORA	P35398	523 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	HCAR3	P49019	387 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	KLK7	P49862	253 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	CDH6	P55285	790 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	JAM2	P57087	298 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	POLR2F	P61218	127 aa	Known RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	DSC2	Q02487	901 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	ART3	Q13508	389 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	IHH	Q14623	411 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	SYCP1	Q15431	976 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	DCAF10	Q5QP82	559 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	AGAP9	Q5VTM2	703 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	SPOCD1	Q6ZMY3	1216 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	RAVER1	Q8IY67	606 aa	Known RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	FER1L6-AS2	Q96M78	137 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	TRAPPC9	Q96Q05	1148 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	WDR77	Q9BQA1	342 aa	Predicted RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	TDRD1	Q9BXT4	1180 aa	Known RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	POLR1E	Q9GZS1	481 aa	Known RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZWILCH	Q9H900	591 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	FANCE	Q9HB96	536 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	LATS2	Q9NRM7	1088 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	PCMTD2	Q9NV79	361 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	WDR37	Q9Y2I8	494 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	PADI2	Q9Y2J8	665 aa		10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.25	□□□□□ -0.77
CLDND1-231	ENST00000515620	OR5K3	A6NET4	321 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620		H3BRJ5	948 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	LDB2	O43679	373 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	KLHL41	O60662	606 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZBTB11	O95625	1053 aa	Predicted RBP	10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	PRL	P01236	227 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	CA4	P22748	312 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	AMPD1	P23109	780 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	MIP	P30301	263 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	HAL	P42357	657 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ARCN1	P48444	511 aa	Known RBP	10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF135	P52742	658 aa	Predicted RBP	10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	TESK1	Q15569	626 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	HIF1A	Q16665	826 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ANKRD20A8P	Q5CZ79	823 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	TMTC4	Q5T4D3	741 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	FBXO38	Q6PIJ6	1188 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	WASH2P	Q6VEQ5	465 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF547	Q8IVP9	402 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	PARP9	Q8IXQ6	854 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	CCHCR1	Q8TD31	782 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	GLYATL1	Q969I3	302 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF653	Q96CK0	615 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	PPM1M	Q96MI6	270 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	IP6K3	Q96PC2	410 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	LYSMD1	Q96S90	227 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	TRIM8	Q9BZR9	551 aa		10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.24	□□□□□ -0.77
CLDND1-231	ENST00000515620	PIKFYVE	Q9Y2I7	2098 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	TACC2	O95359	2948 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	RGSL1	A5PLK6	1076 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	TMEM150C	B9EJG8	249 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	PEX12	O00623	359 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	EPHB6	O15197	1021 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	SLC4A1	P02730	911 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	VCL	P18206	1134 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	CYP2A7	P20853	494 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	HTR1E	P28566	365 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	ARL4A	P40617	200 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	RPL26	P61254	145 aa	Known RBP	10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	RPE65	Q16518	533 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	KHDC1	Q4VXA5	237 aa	Known RBP	10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	SPNS3	Q6ZMD2	512 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	OOSP2	Q86WS3	158 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	TRAPPC5	Q8IUR0	188 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	MCOLN2	Q8IZK6	566 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	TEX26	Q8N6G2	289 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	GPR26	Q8NDV2	337 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	OR1L3	Q8NH93	324 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	FAR1	Q8WVX9	515 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZSCAN5A	Q9BUG6	496 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	SLC7A5P2	Q9GIP4	190 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	PCDH9	Q9HC56	1237 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	HRASLS2	Q9NWW9	162 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	PSMD13	Q9UNM6	376 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	RPL26L1	Q9UNX3	145 aa	Known RBP	10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	BTRC	Q9Y297	605 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms