RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 RPL5P46777 297 aaKnown RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 ERVPABLB-1P60509 514 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 TXNL4AP83876 142 aaKnown RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 TLE2Q04725 743 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 MAD2L1Q13257 205 aaPredicted RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 EML3Q32P44 896 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 CDKL4Q5MAI5 379 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 C1orf53Q5VUE5 145 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 TXNDC8Q6A555 127 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 SULT1C3Q6IMI6 304 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 SBSNQ6UWP8 590 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 FAM151BQ6UXP7 276 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 GOLGA7Q7Z5G4 137 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 GALNT15Q8N3T1 639 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 CDYL2Q8N8U2 506 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 FNDC5Q8NAU1 212 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 TMEM125Q96AQ2 219 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 EID2BQ96D98 161 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 CNBD2Q96M20 576 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 SLC22A12Q96S37 553 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 SLC39A3Q9BRY0 314 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 SLC2A11Q9BYW1 496 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 NOL11Q9H8H0 719 aaKnown RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 COQ10BQ9H8M1 238 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 IL1RL2Q9HB29 575 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 RDH14Q9HBH5 336 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 PAPOLBQ9NRJ5 636 aaKnown RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 LATS2Q9NRM7 1088 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 CMTM6Q9NX76 183 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 EVLQ9UI08 416 aaPredicted RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 PTBP2Q9UKA9 531 aaKnown RBP14.65□□□□□ -0.06
NUP54-217ENST00000514987 ST14Q9Y5Y6 855 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 OBSL1O75147 1896 aa14.65□□□□□ -0.06
NUP54-217ENST00000514987 TRAV19A0A0A6YYK7 116 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 A0A1W2PQ67 120 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ZNF839A8K0R7 811 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 EIF3FO00303 357 aaPredicted RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 AKAP10O43572 662 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 C7P10643 843 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PCSK2P16519 638 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ATP6V1B2P21281 511 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 HMOX2P30519 316 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PIK3CGP48736 1102 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CCNHP51946 323 aaPredicted RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 ATN1P54259 1190 aaPredicted RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 SNRPD1P62314 119 aaKnown RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 CDKN3Q16667 212 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 TBCELQ5QJ74 424 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 INTS11Q5TA45 600 aaKnown RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 ZDHHC20Q5W0Z9 365 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PPP4R4Q6NUP7 873 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ZFAND4Q86XD8 727 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PROSER1Q86XN7 944 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 APCDD1Q8J025 514 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 DPP10Q8N608 796 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ZBTB2Q8N680 514 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 UBTD2Q8WUN7 234 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CANT1Q8WVQ1 401 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ISG20Q96AZ6 181 aaKnown RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 PPP3R2Q96LZ3 170 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 TM6SF2Q9BZW4 377 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 IL26Q9NPH9 171 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 UBAP1Q9NZ09 502 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CRLS1Q9UJA2 301 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 LZTS1Q9Y250 596 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 TRIM17Q9Y577 477 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ANGPTL3Q9Y5C1 460 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PCNTO95613 3336 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 BPTFQ12830 3046 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 K7ERQ8 282 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ARNTLO00327 626 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 SLC28A1O00337 649 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 GAPDHSO14556 408 aaPredicted RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 WDR47O94967 919 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ARHGEF15O94989 841 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PRAMEF12O95522 483 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CLPTM1O96005 669 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CKMP06732 381 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CAPN1P07384 714 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ENO2P09104 434 aaPredicted RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 FASP25445 335 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 GABRR2P28476 465 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 HNF1BP35680 557 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PEX19P40855 299 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 UFM1P61960 85 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 PTPRRQ15256 657 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 C6orf52Q5T4I8 152 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 GPRC6AQ5T6X5 926 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 LETMD1Q6P1Q0 360 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ZBTB49Q6ZSB9 765 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 CCDC149Q6ZUS6 474 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 MILR1Q7Z6M3 343 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 OR2AP1Q8NGE2 309 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 OR2T11Q8NH01 316 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 WFDC5Q8TCV5 224 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 NCSTNQ92542 709 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 ACOX2Q99424 681 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 KCTD14Q9BQ13 255 aaPredicted RBP14.64□□□□□ -0.07
NUP54-217ENST00000514987 ALG2Q9H553 416 aa14.64□□□□□ -0.07
NUP54-217ENST00000514987 RC3H2Q9HBD1 1191 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms