RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-208	ENST00000513965	IMP4	Q96G21	291 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	GBP4	Q96PP9	640 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	GPR87	Q9BY21	358 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A7	Q9HAW7	530 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A10	Q9HAW8	530 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A8	Q9HAW9	530 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	CBX8	Q9HC52	389 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	WASH6P	Q9NQA3	447 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	FGF21	Q9NSA1	209 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	IMP3	Q9NV31	184 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	HRASLS2	Q9NWW9	162 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	FAM8A1	Q9UBU6	413 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	EPHA6	Q9UF33	1036 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	USP9Y	O00507	2555 aa	Predicted RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	LRRD1	A4D1F6	860 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	GOLGA6L3	A6NEY3	463 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	OR2AG2	A6NM03	316 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965		F5H423	210 aa	Predicted RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	ZNF185	O15231	689 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	BUD23	O43709	281 aa	Known RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	SCRG1	O75711	98 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	RECK	O95980	971 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	ATXN8OS	P0DMR3	200 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	FECH	P22830	423 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	COL8A1	P27658	744 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	ACY1	Q03154	408 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	MRPL49	Q13405	166 aa	Known RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	NFE2L1	Q14494	772 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	MESD	Q14696	234 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	NOMO1	Q15155	1222 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	INPP5J	Q15735	1006 aa	Predicted RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	PDPK2P	Q6A1A2	396 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	LCN10	Q6JVE6	187 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	CYB5D1	Q6P9G0	228 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	KLHL35	Q6PF15	583 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	TMEM220	Q6QAJ8	160 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	SLC25A41	Q8N5S1	370 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	PLD5	Q8N7P1	536 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	RASGEF1A	Q8N9B8	481 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	SLC38A9	Q8NBW4	561 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	NAT14	Q8WUY8	206 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	FAF2	Q96CS3	445 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	SLC41A2	Q96JW4	573 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	ZNF514	Q96K75	400 aa	Predicted RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	PACSIN1	Q9BY11	444 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	RAB33B	Q9H082	229 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	SLC25A51	Q9H1U9	297 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	CHST8	Q9H2A9	424 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	SLAMF7	Q9NQ25	335 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	MAP4K5	Q9Y4K4	846 aa		11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	UTP20	O75691	2785 aa	Known RBP	11.12	□□□□□ -0.63
COPG1-208	ENST00000513965	ICE1	Q9Y2F5	2266 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	TCP11X1	B4DZS4	312 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	GOLGA6L22	H0YM25	854 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	APOL1	O14791	398 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	GPR39	O43194	453 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	LCA5L	O95447	670 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	NDST3	O95803	873 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	KLK3	P07288	261 aa	Predicted RBP	11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	TNNT1	P13805	278 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	CA5A	P35218	305 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	PTGIR	P43119	386 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	CTSC	P53634	463 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	DYNLT1	P63172	113 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	HSD11B2	P80365	405 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	GPS2	Q13227	327 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	XRCC4	Q13426	336 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	RAPSN	Q13702	412 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	PDK1	Q15118	436 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	LLGL1	Q15334	1064 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	CHRNA6	Q15825	494 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	PPP2R5E	Q16537	467 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	FNBP1L	Q5T0N5	605 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	ARMC6	Q6NXE6	501 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	DUS1L	Q6P1R4	473 aa	Known RBP	11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	FAM151B	Q6UXP7	276 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	DET1	Q7L5Y6	550 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	SYVN1	Q86TM6	617 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	BPHL	Q86WA6	291 aa	Predicted RBP	11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	BEND7	Q8N7W2	519 aa	Predicted RBP	11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	BRSK1	Q8TDC3	778 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	SEC14L1	Q92503	715 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	SYN2	Q92777	582 aa	Predicted RBP	11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	RNF25	Q96BH1	459 aa	Predicted RBP	11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	PPM1M	Q96MI6	270 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	BPIFA3	Q9BQP9	254 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	GLOD4	Q9HC38	313 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	IL26	Q9NPH9	171 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	KCND1	Q9NSA2	647 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	SOHLH2	Q9NX45	425 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	TMEM63C	Q9P1W3	806 aa		11.11	□□□□□ -0.63
COPG1-208	ENST00000513965	NOTCH2	Q04721	2471 aa		11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	OR6C74	A6NCV1	312 aa		11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	OR5K3	A6NET4	321 aa		11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	KRT86	O43790	486 aa		11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	CPNE3	O75131	537 aa	Known RBP	11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	POLB	P06746	335 aa		11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	H2AFZ	P0C0S5	128 aa		11.1	□□□□□ -0.63
COPG1-208	ENST00000513965	TUBB4B	P68371	445 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms