RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ARNTLO00327 626 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 AZIN1O14977 448 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 RAD51BO15315 384 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 GYG2O15488 501 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 GPR39O43194 453 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 VPS4BO75351 444 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 SUPT3HO75486 399 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 GSTM1P09488 218 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 C7P10643 843 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 THRAP10827 490 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 ATP1B2P14415 290 aaPredicted RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 GM2AP17900 193 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 AOAHP28039 575 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 EEF1DP29692 281 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 TNFRSF4P43489 277 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 MRPL19P49406 292 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 RAP1GDS1P52306 607 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 PKNOX1P55347 436 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 SH3BP2P78314 561 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 GSTM4Q03013 218 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 BTKQ06187 659 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 DPTQ07507 201 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 UBAP2LQ14157 1087 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 TGFBIQ15582 683 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 PFKFB4Q16877 469 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 ZNF284Q2VY69 593 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 ITPRIPL2Q3MIP1 535 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 FNDC3BQ53EP0 1204 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 WASHC2DQ5SRD0 308 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 LDLRAP1Q5SW96 308 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 RINLQ6ZS11 566 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 MTSS1LQ765P7 747 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 TDHQ8IZJ6 230 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 ARHGAP24Q8N264 748 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 TEX9Q8N6V9 391 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 RP9Q8TA86 221 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 PIP4K2CQ8TBX8 421 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 LKAAEAR1Q8TD35 194 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 MAGEC3Q8TD91 643 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 BTN2A2Q8WVV5 523 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 MYLIPQ8WY64 445 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 ARRDC3Q96B67 414 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 MOCOSQ96EN8 888 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 DTD2Q96FN9 168 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 NECTIN4Q96NY8 510 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 MIPEPQ99797 713 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 HDAC8Q9BY41 377 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 CADM1Q9BY67 442 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 NUF2Q9BZD4 464 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 PLA2G2FQ9BZM2 168 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 ABCG8Q9H221 673 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 WDR55Q9H6Y2 383 aaPredicted RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 PFDN4Q9NQP4 134 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.25□□□□□ -1.09
RNF4-220ENST00000513578 GTSE1Q9NYZ3 720 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 EPS15L1Q9UBC2 864 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 PTBP2Q9UKA9 531 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 PCTPQ9UKL6 214 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 FNDC3AQ9Y2H6 1198 aaKnown RBP8.25□□□□□ -1.09
RNF4-220ENST00000513578 ST14Q9Y5Y6 855 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 BPTFQ12830 3046 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 TBC1D3BA6NDS4 549 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 IQCF5A8MTL0 148 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 A8MX80 341 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 C1QTNF3-AMACRE9PGA6 284 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SOX1O00570 391 aaPredicted RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 E2F3O00716 465 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 WNT9AO14904 365 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 FFAR2O15552 330 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SPINT1O43278 529 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 AP1G1O43747 822 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SGTAO43765 313 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SNX2O60749 519 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 GPC4O75487 556 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 KAT7O95251 611 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SIX3O95343 332 aaPredicted RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 ESRRBO95718 433 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 FTH1P02794 183 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 S100BP04271 92 aaPredicted RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 APODP05090 189 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 ENO1P06733 434 aaKnown RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 C8GP07360 202 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 COX4I1P13073 169 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 NCF2P19878 526 aaPredicted RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 EPHA3P29320 983 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 GGT5P36269 586 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 CPOXP36551 454 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 MAPK9P45984 424 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 COPAP53621 1224 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 KDSRQ06136 332 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 MESP2Q0VG99 397 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 GRIK2Q13002 908 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SP140Q13342 867 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 TTC31Q49AM3 519 aaPredicted RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 ACSBG2Q5FVE4 666 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 FAM46CQ5VWP2 391 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 FBXW10Q5XX13 1052 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SULT1C3Q6IMI6 304 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 RFLNAQ6ZTI6 216 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 Q6ZVL8 140 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms