RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 VWA3AA6NCI4 1184 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 STMND1H3BQB6 276 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 FFAR2O15552 330 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 IRAK2O43187 625 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 HNRNPRO43390 633 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PLRG1O43660 514 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 TBCAO75347 108 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SNUPNO95149 360 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 KRT18P05783 430 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 LPLP06858 475 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 AGXTP21549 392 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CTSSP25774 331 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CERS1P27544 350 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 HOXD9P28356 352 aaPredicted RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CORO1AP31146 461 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CCKARP32238 428 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 DDIT3P35638 169 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 RECQLP46063 649 aaPredicted RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PGFP49763 221 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PDX1P52945 283 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 TNNC1P63316 161 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CYP4F2P78329 520 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 MC1RQ01726 317 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 TRIM25Q14258 630 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ELAVL3Q14576 367 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CDKN3Q16667 212 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CLPPQ16740 277 aaPredicted RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 MIDNQ504T8 468 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 DCAF6Q58WW2 860 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 TOR2AQ5JU69 321 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ARL6IP4Q66PJ3 421 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 KAZNQ674X7 775 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 FOXR2Q6PJQ5 311 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 LVRNQ6Q4G3 990 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ABI3BPQ7Z7G0 1075 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ZSCAN30Q86W11 494 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 KRT73Q86Y46 540 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 LYSMD2Q8IV50 215 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 DENND1CQ8IV53 801 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 MMAAQ8IVH4 418 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CCDC117Q8IWD4 279 aaPredicted RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM114A1Q8IWE2 563 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 GPD1LQ8N335 351 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 AADATQ8N5Z0 425 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ZMIZ2Q8NF64 920 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 FBXO18Q8NFZ0 1043 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 OR5B17Q8NGF7 314 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 DENND1AQ8TEH3 1009 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 APOBEC4Q8WW27 367 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SYAP1Q96A49 352 aaPredicted RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CALML4Q96GE6 196 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC45A3Q96JT2 553 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SPAG5Q96R06 1193 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 MED15Q96RN5 788 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 GFM1Q96RP9 751 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 HAPLN3Q96S86 360 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PPP1R9BQ96SB3 815 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SMAD5Q99717 465 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SMOQ99835 787 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 CCDC3Q9BQI4 270 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 TMEM79Q9BSE2 394 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 MTMR12Q9C0I1 747 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 QRSL1Q9H0R6 528 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 NMUR1Q9HB89 426 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 TCF7L1Q9HCS4 588 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PREBQ9HCU5 417 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 NRIP3Q9NQ35 241 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 OLA1Q9NTK5 396 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ABCB8Q9NUT2 735 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PADI4Q9UM07 663 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 EDARQ9UNE0 448 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 HBS1LQ9Y450 684 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 KIF3AQ9Y496 699 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 NME7Q9Y5B8 376 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 PCDHGA3Q9Y5H0 932 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 UNC13CQ8NB66 2214 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 NIPBLQ6KC79 2804 aaeCLIP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 NAV3Q8IVL0 2385 aa3.71□□□□□ -1.81
PDLIM5-218ENST00000513341 UBE4BO95155 1302 aa3.71□□□□□ -1.81
PDLIM5-218ENST00000513341 SVILO95425 2214 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MED13LQ71F56 2210 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 PRRC2CQ9Y520 2896 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 A6NNZ2 444 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 PP2D1A8MPX8 630 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 TISP43B9A030 160 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 HHLA1C9JL84 531 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 LMO7DNF2Z398 122 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 TOR1BO14657 336 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ALOX15BO15296 676 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 YY2O15391 372 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 AQP9O43315 295 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 STX6O43752 255 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 BEST1O76090 585 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MOCS3O95396 460 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MT-CO1P00395 513 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 IL1BP01584 269 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 CENPBP07199 599 aaPredicted RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 KRT7P08729 469 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 FAM200BP0CF97 657 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 P4HA1P13674 534 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms