RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FZD10Q9ULW2 581 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 MATN2O00339 956 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FSCN2O14926 492 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CASKO14936 926 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TRIM24O15164 1050 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GPR37L1O60883 481 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CST3P01034 146 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 ALOX5P09917 674 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZNF823P16415 610 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 MPIP34949 423 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LY6G5CQ5SRR4 150 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FAM91A1Q658Y4 838 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ERN2Q76MJ5 926 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 PROSER1Q86XN7 944 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FAM174AQ8TBP5 190 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZNF641Q96N77 438 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 LMAN1LQ9HAT1 526 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FTSJ1Q9UET6 329 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GPR34Q9UPC5 381 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LRRC10BA6NIK2 292 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 C2orf74A8MZ97 194 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GABRDO14764 452 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 BIRC5O15392 142 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RRP8O43159 456 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 PPP1R11O60927 126 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 REM1O75628 298 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 AP2A2O94973 939 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SLURP2P0DP57 97 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ACADSP16219 412 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 VHLP40337 213 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CPA2P48052 419 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TMED10P49755 219 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 NAGLUP54802 743 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KLC1Q07866 573 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TNK2Q07912 1038 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 NFATC2Q13469 925 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PDCD4Q53EL6 469 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 RNF43Q68DV7 783 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LRRC55Q6ZSA7 311 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PRSS58Q8IYP2 241 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LRRC34Q8IZ02 419 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FSTL5Q8N475 847 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 Q8N9G6 341 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 OR2AJ1Q8NGZ0 328 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 EMID1Q96A84 441 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZBED6CLQ96FA7 236 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 PDLIM2Q96JY6 352 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SEPHS2Q99611 448 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 EPYCQ99645 322 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KCNH6Q9H252 994 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KLHL1Q9NR64 748 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZNF624Q9P2J8 865 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 PIAS3Q9Y6X2 628 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 UBR1Q8IWV7 1749 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 BBIP1A8MTZ0 92 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 AXIN1O15169 862 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KHKP50053 298 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SMU1Q2TAY7 513 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TRMT5Q32P41 509 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 TMEM154Q6P9G4 183 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 UNQ6126/PRO20091Q6UXV3 157 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KRT74Q7RTS7 529 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 COX18Q8N8Q8 333 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TRPV3Q8NET8 790 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 OR6C4Q8NGE1 309 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RNF145Q96MT1 663 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 OR52E6Q96RD3 313 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CPXM1Q96SM3 734 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KLHL25Q9H0H3 589 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PNO1Q9NRX1 252 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 CHST7Q9NS84 486 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TBC1D23Q9NUY8 699 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PCDH10Q9P2E7 1040 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CICQ96RK0 1608 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 ACOT7O00154 380 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SEMA3DO95025 777 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CCNB2O95067 398 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SDHBP21912 280 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RCVRNP35243 200 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 AP1S2P56377 157 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 C22orf39Q6P5X5 142 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 DNM1P34Q6PK57 102 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FIP1L1Q6UN15 594 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 STK32CQ86UX6 486 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PLXDC1Q8IUK5 500 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 REXO1L1PQ8IX06 675 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZSCAN4Q8NAM6 433 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 DNAJB8Q8NHS0 232 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 OR2M4Q96R27 311 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TXNRD2Q9NNW7 524 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RASSF1Q9NS23 344 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CCDC167Q9P0B6 97 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PCYOX1Q9UHG3 505 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SH3GLB1Q9Y371 365 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 YKT6O15498 198 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SUV39H1O43463 412 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KDELR3O43731 214 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KLRC4O43908 158 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CAPN1P07384 714 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ITGA2BP08514 1039 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms