RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 EFCAB7A8K855 629 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CDRT15L2A8MXV6 281 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CFAP99D6REC4 459 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CES2O00748 559 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 GAPDHSO14556 408 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 HGSO14964 777 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ZSCAN12O43309 604 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 LIASO43766 372 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CEP104O60308 925 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 UBXN7O94888 489 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 POLBP06746 335 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 SLC35G4P0C7Q5 338 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 THRAP10827 490 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CXCR5P32302 372 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CA5AP35218 305 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 MLLT3P42568 568 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CLCNKAP51800 687 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ZNF140P52738 457 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 LIMK2P53671 638 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 TERF1P54274 439 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 EPHA4P54764 986 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 UCNP55089 124 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ZFP36L1Q07352 338 aaKnown RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CLN3Q13286 438 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 TRA2AQ13595 282 aaKnown RBP eCLIP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 NFE2L1Q14494 772 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 KRT33BQ14525 404 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 SIX1Q15475 284 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 TGIF1Q15583 401 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CLPPQ16740 277 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CCDC38Q502W7 563 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 IRGCQ6NXR0 463 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 TMEM71Q6P5X7 295 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 RANBP10Q6VN20 620 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 GPR155Q7Z3F1 870 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CLEC14AQ86T13 490 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 PRUNE1Q86TP1 453 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 LINC00523Q86TU6 105 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ZFAND4Q86XD8 727 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 SLC13A5Q86YT5 568 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 KLHDC8BQ8IXV7 354 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 DDHD1Q8NEL9 900 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 OR52K1Q8NGK4 314 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 SLC35B2Q8TB61 432 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ART4Q93070 314 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ULK4Q96C45 1275 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 RNF31Q96EP0 1072 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 DNAJC1Q96KC8 554 aaKnown RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 TGM7Q96PF1 710 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 COPS8Q99627 209 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CTRCQ99895 268 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 DPYSL5Q9BPU6 564 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 RAB6BQ9NRW1 208 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 SMOXQ9NWM0 555 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 OCIAD1Q9NX40 245 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 SLC39A1Q9NY26 324 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ZNF624Q9P2J8 865 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 FEZ2Q9UHY8 353 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 JRKLQ9Y4A0 524 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 PCDHGA7Q9Y5G6 932 aa6.39□□□□□ -1.39
KDM3B-208ENST00000512928 CFAP20Q9Y6A4 193 aaKnown RBP6.39□□□□□ -1.39
KDM3B-208ENST00000512928 RP1P56715 2156 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 LILRA5A6NI73 299 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 C9orf172C9J069 976 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 NVLO15381 856 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PSMD3O43242 534 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 LDB2O43679 373 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 AP2A1O95782 977 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 FGGP02679 453 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 APRTP07741 180 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PRSS56P0CW18 603 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 LIPCP11150 499 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 FGF3P11487 239 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ETS1P14921 441 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 BRAFP15056 766 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 XRCC1P18887 633 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 STIP1P31948 543 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 SLC19A1P41440 591 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 SEPHS1P49903 392 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 GFERP55789 205 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 UBE2IP63279 158 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 BASP1P80723 227 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 CFHR1Q03591 330 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 FOXM1Q08050 763 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 VAC14Q08AM6 782 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 CDH17Q12864 832 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 GPR18Q14330 331 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 CLCA4Q14CN2 919 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 KCTD19Q17RG1 926 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 TAF1BQ53T94 588 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 MANEAQ5SRI9 462 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 DCAF12Q5T6F0 453 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 AGAP9Q5VTM2 703 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PAPD7Q5XG87 772 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ANKS6Q68DC2 871 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms